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\n \n\n \n \n Hirose, E., Aoki, M. N., & Nishikawa, J.\n\n\n \n \n \n \n \n Still alive? Fine structure of the barrels made by Phronima (Crustacea: Amphipoda).\n \n \n \n \n\n\n \n\n\n\n Journal of the Marine Biological Association of the United Kingdom, 85(6): 1435–1439. December 2005.\n \n\n\n\n
\n\n\n\n \n \n \"StillPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n  \n \n abstract \n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{hirose_still_2005,\n\ttitle = {Still alive? {Fine} structure of the barrels made by \\textit{{Phronima}} ({Crustacea}: {Amphipoda})},\n\tvolume = {85},\n\tissn = {0025-3154, 1469-7769},\n\tshorttitle = {Still alive?},\n\turl = {https://www.cambridge.org/core/product/identifier/S0025315405012610/type/journal_article},\n\tdoi = {10.1017/S0025315405012610},\n\tabstract = {Amphipods of the genus\n              Phronima\n              are known to make a barrel-shaped house from the gelatinous matrix of pelagic tunicates or siphonophores. Among the seven barrels examined here, one barrel of\n              Phronima curvipes\n              was supposed to be made from a swimming bell of a siphonophore based on its morphology, while the other six barrels made by\n              P. sedentaria\n              were immunochemically and/or morphologically identified as tunicates (i.e.\n              Thetys vagina\n              , other salps and pyrosomas). Histological observation showed that the phronimids had completely eaten the animal tissues other than the gelatinous matrix (i.e. tunic or mesoglea). Tunic cells were found in the tunicate barrel and some were probably tunic phagocytes that appeared to be alive and functional. In the tunicate barrels, cuticular layers of the tunic were found on both the outer and inner side of the barrel wall. Tunic cuticle would be regenerated on the inner side after the epidermis was grazed by the phronimids. The cuticular layers would protect the tunic matrix from the invasion of microorganisms. In the barrel supposed to originate from\n              Thetys vagina\n              , there are minute protrusions on the tunic cuticle as found in the intact tunic of this species. In the barrel from a siphonophore, neither cells nor cuticle regeneration were found. No bacteria were observed in the barrel, suggesting that the barrel has some antibiotic system.},\n\tlanguage = {en},\n\tnumber = {6},\n\turldate = {2021-07-26},\n\tjournal = {Journal of the Marine Biological Association of the United Kingdom},\n\tauthor = {Hirose, Euichi and Aoki, Masakazu N. and Nishikawa, Jun},\n\tmonth = dec,\n\tyear = {2005},\n\tpages = {1435--1439},\n}\n\n
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\n Amphipods of the genus Phronima are known to make a barrel-shaped house from the gelatinous matrix of pelagic tunicates or siphonophores. Among the seven barrels examined here, one barrel of Phronima curvipes was supposed to be made from a swimming bell of a siphonophore based on its morphology, while the other six barrels made by P. sedentaria were immunochemically and/or morphologically identified as tunicates (i.e. Thetys vagina , other salps and pyrosomas). Histological observation showed that the phronimids had completely eaten the animal tissues other than the gelatinous matrix (i.e. tunic or mesoglea). Tunic cells were found in the tunicate barrel and some were probably tunic phagocytes that appeared to be alive and functional. In the tunicate barrels, cuticular layers of the tunic were found on both the outer and inner side of the barrel wall. Tunic cuticle would be regenerated on the inner side after the epidermis was grazed by the phronimids. The cuticular layers would protect the tunic matrix from the invasion of microorganisms. In the barrel supposed to originate from Thetys vagina , there are minute protrusions on the tunic cuticle as found in the intact tunic of this species. In the barrel from a siphonophore, neither cells nor cuticle regeneration were found. No bacteria were observed in the barrel, suggesting that the barrel has some antibiotic system.\n
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\n \n\n \n \n Matsuoka, T., Awazu, S., Shoguchi, E., Satoh, N., & Sasakura, Y.\n\n\n \n \n \n \n \n Germline transgenesis of the ascidian Ciona intestinalis by electroporation.\n \n \n \n \n\n\n \n\n\n\n genesis, 41(2): 67–72. February 2005.\n \n\n\n\n
\n\n\n\n \n \n \"GermlinePaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{matsuoka_germline_2005,\n\ttitle = {Germline transgenesis of the ascidian \\textit{{Ciona} intestinalis} by electroporation},\n\tvolume = {41},\n\tissn = {1526-954X, 1526-968X},\n\turl = {https://onlinelibrary.wiley.com/doi/10.1002/gene.20096},\n\tdoi = {10.1002/gene.20096},\n\tlanguage = {en},\n\tnumber = {2},\n\turldate = {2021-07-26},\n\tjournal = {genesis},\n\tauthor = {Matsuoka, Terumi and Awazu, Satoko and Shoguchi, Eiichi and Satoh, Nori and Sasakura, Yasunori},\n\tmonth = feb,\n\tyear = {2005},\n\tpages = {67--72},\n}\n\n
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\n \n\n \n \n Murata, Y., Iwasaki, H., Sasaki, M., Inaba, K., & Okamura, Y.\n\n\n \n \n \n \n \n Phosphoinositide phosphatase activity coupled to an intrinsic voltage sensor.\n \n \n \n \n\n\n \n\n\n\n Nature, 435(7046): 1239–1243. June 2005.\n \n\n\n\n
\n\n\n\n \n \n \"PhosphoinositidePaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n  \n \n 1 download\n \n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{murata_phosphoinositide_2005,\n\ttitle = {Phosphoinositide phosphatase activity coupled to an intrinsic voltage sensor},\n\tvolume = {435},\n\tissn = {0028-0836, 1476-4687},\n\turl = {http://www.nature.com/articles/nature03650},\n\tdoi = {10.1038/nature03650},\n\tlanguage = {en},\n\tnumber = {7046},\n\turldate = {2021-07-26},\n\tjournal = {Nature},\n\tauthor = {Murata, Yoshimichi and Iwasaki, Hirohide and Sasaki, Mari and Inaba, Kazuo and Okamura, Yasushi},\n\tmonth = jun,\n\tyear = {2005},\n\tpages = {1239--1243},\n}\n\n
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\n \n\n \n \n Nakaya, F., Saito, Y., & Motokawa, T.\n\n\n \n \n \n \n \n Experimental allometry: effect of size manipulation on metabolic rate of colonial ascidians.\n \n \n \n \n\n\n \n\n\n\n Proceedings of the Royal Society B: Biological Sciences, 272(1575): 1963–1969. September 2005.\n \n\n\n\n
\n\n\n\n \n \n \"ExperimentalPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n  \n \n abstract \n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{nakaya_experimental_2005,\n\ttitle = {Experimental allometry: effect of size manipulation on metabolic rate of colonial ascidians},\n\tvolume = {272},\n\tissn = {0962-8452, 1471-2954},\n\tshorttitle = {Experimental allometry},\n\turl = {https://royalsocietypublishing.org/doi/10.1098/rspb.2005.3143},\n\tdoi = {10.1098/rspb.2005.3143},\n\tabstract = {The allometric scaling of metabolic rate of organisms, the three-quarters power rule, has led to a questioning of the basis for the relation. We attacked this problem experimentally for the first time by employing the modular organism, the ascidian that forms a single layered flat colony, as a model system. The metabolic rate and colony size followed the three-quarters power relation, which held even after the colony size was experimentally manipulated. Our results established that the three-quarters power relation is a real continuous function, not an imaginary statistical regression. The fact that all the hypotheses failed to explain why the two-dimensional organism adhered to the three-quarters power relation led us to propose a new hypothesis, in which the allometric relation derives from the self-organized criticality based on local interaction between modulus-comprising organisms.},\n\tlanguage = {en},\n\tnumber = {1575},\n\turldate = {2021-07-26},\n\tjournal = {Proceedings of the Royal Society B: Biological Sciences},\n\tauthor = {Nakaya, Fumio and Saito, Yasunori and Motokawa, Tatsuo},\n\tmonth = sep,\n\tyear = {2005},\n\tpages = {1963--1969},\n}\n\n
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\n The allometric scaling of metabolic rate of organisms, the three-quarters power rule, has led to a questioning of the basis for the relation. We attacked this problem experimentally for the first time by employing the modular organism, the ascidian that forms a single layered flat colony, as a model system. The metabolic rate and colony size followed the three-quarters power relation, which held even after the colony size was experimentally manipulated. Our results established that the three-quarters power relation is a real continuous function, not an imaginary statistical regression. The fact that all the hypotheses failed to explain why the two-dimensional organism adhered to the three-quarters power relation led us to propose a new hypothesis, in which the allometric relation derives from the self-organized criticality based on local interaction between modulus-comprising organisms.\n
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\n \n\n \n \n Nakayama, A., Satoh, N., & Sasakura, Y.\n\n\n \n \n \n \n \n Tissue-Specific Profile of DNA Replication in the Swimming Larvae of Ciona intestinalis.\n \n \n \n \n\n\n \n\n\n\n Zoological Science, 22(3): 301–309. March 2005.\n \n\n\n\n
\n\n\n\n \n \n \"Tissue-SpecificPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{nakayama_tissue-specific_2005,\n\ttitle = {Tissue-{Specific} {Profile} of {DNA} {Replication} in the {Swimming} {Larvae} of \\textit{{Ciona} intestinalis}},\n\tvolume = {22},\n\tissn = {0289-0003},\n\turl = {http://www.bioone.org/doi/abs/10.2108/zsj.22.301},\n\tdoi = {10.2108/zsj.22.301},\n\tlanguage = {en},\n\tnumber = {3},\n\turldate = {2021-07-26},\n\tjournal = {Zoological Science},\n\tauthor = {Nakayama, Akie and Satoh, Nori and Sasakura, Yasunori},\n\tmonth = mar,\n\tyear = {2005},\n\tpages = {301--309},\n}\n\n
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\n \n\n \n \n Sasakura, Y., Nakashima, K., Awazu, S., Matsuoka, T., Nakayama, A., Azuma, J., & Satoh, N.\n\n\n \n \n \n \n \n Transposon-mediated insertional mutagenesis revealed the functions of animal cellulose synthase in the ascidian Ciona intestinalis.\n \n \n \n \n\n\n \n\n\n\n Proceedings of the National Academy of Sciences, 102(42): 15134–15139. October 2005.\n \n\n\n\n
\n\n\n\n \n \n \"Transposon-mediatedPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{sasakura_transposon-mediated_2005,\n\ttitle = {Transposon-mediated insertional mutagenesis revealed the functions of animal cellulose synthase in the ascidian \\textit{{Ciona} intestinalis}},\n\tvolume = {102},\n\tissn = {0027-8424, 1091-6490},\n\turl = {http://www.pnas.org/cgi/doi/10.1073/pnas.0503640102},\n\tdoi = {10.1073/pnas.0503640102},\n\tlanguage = {en},\n\tnumber = {42},\n\turldate = {2021-07-26},\n\tjournal = {Proceedings of the National Academy of Sciences},\n\tauthor = {Sasakura, Y. and Nakashima, K. and Awazu, S. and Matsuoka, T. and Nakayama, A. and Azuma, J.-i. and Satoh, N.},\n\tmonth = oct,\n\tyear = {2005},\n\tpages = {15134--15139},\n}\n\n
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\n \n\n \n \n Satouh, Y., Padma, P., Toda, T., Satoh, N., Ide, H., & Inaba, K.\n\n\n \n \n \n \n \n Molecular Characterization of Radial Spoke Subcomplex Containing Radial Spoke Protein 3 and Heat Shock Protein 40 in Sperm Flagella of the Ascidian Ciona intestinalis.\n \n \n \n \n\n\n \n\n\n\n Molecular Biology of the Cell, 16(2): 626–636. February 2005.\n \n\n\n\n
\n\n\n\n \n \n \"MolecularPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n  \n \n abstract \n \n\n \n  \n \n 1 download\n \n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{satouh_molecular_2005,\n\ttitle = {Molecular {Characterization} of {Radial} {Spoke} {Subcomplex} {Containing} {Radial} {Spoke} {Protein} 3 and {Heat} {Shock} {Protein} 40 in {Sperm} {Flagella} of the {Ascidian} \\textit{{Ciona} intestinalis}},\n\tvolume = {16},\n\tissn = {1059-1524, 1939-4586},\n\turl = {https://www.molbiolcell.org/doi/10.1091/mbc.e04-09-0784},\n\tdoi = {10.1091/mbc.e04-09-0784},\n\tabstract = {Members of the heat-shock protein (HSP)40 regulate the protein folding activity of HSP70 proteins and help the functional specialization of this molecular chaperone system in various types of cellular events. We have recently identified Hsp40 as a component of flagellar axoneme in the ascidian Ciona intestinalis, suggesting a correlation between Hsp40 related chaperone system and flagellar function. In this study, we have found that Ciona 37-kDa Hsp40 is extracted from KCl-treated axonemes with 0.5 M KI solution and comigrates with radial spoke protein (RSP)3 along with several proteins as a complex through gel filtration and ion exchange columns. Peptide mass fingerprinting with matrix-assisted laser desorption ionization/time of flight/mass spectrometry revealed that other proteins in the complex include a homolog of sea urchin spokehead protein (homolog of RSP4/6), a membrane occupation and recognition nexus repeat protein with sequence similarity with meichroacidin, and a functionally unknown 33-kDa protein. A spoke head protein, LRR37, is not included in the complex, suggesting that the complex constructs the stalk of radial spoke. Immunoelectron microscopy indicates that Hsp40 is localized in the distal portion of spoke stalk, possibly at the junction between spoke head and the stalk.},\n\tlanguage = {en},\n\tnumber = {2},\n\turldate = {2021-07-26},\n\tjournal = {Molecular Biology of the Cell},\n\tauthor = {Satouh, Yuhkoh and Padma, Potturi and Toda, Toshifusa and Satoh, Nori and Ide, Hiroyuki and Inaba, Kazuo},\n\tmonth = feb,\n\tyear = {2005},\n\tpages = {626--636},\n}\n
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\n Members of the heat-shock protein (HSP)40 regulate the protein folding activity of HSP70 proteins and help the functional specialization of this molecular chaperone system in various types of cellular events. We have recently identified Hsp40 as a component of flagellar axoneme in the ascidian Ciona intestinalis, suggesting a correlation between Hsp40 related chaperone system and flagellar function. In this study, we have found that Ciona 37-kDa Hsp40 is extracted from KCl-treated axonemes with 0.5 M KI solution and comigrates with radial spoke protein (RSP)3 along with several proteins as a complex through gel filtration and ion exchange columns. Peptide mass fingerprinting with matrix-assisted laser desorption ionization/time of flight/mass spectrometry revealed that other proteins in the complex include a homolog of sea urchin spokehead protein (homolog of RSP4/6), a membrane occupation and recognition nexus repeat protein with sequence similarity with meichroacidin, and a functionally unknown 33-kDa protein. A spoke head protein, LRR37, is not included in the complex, suggesting that the complex constructs the stalk of radial spoke. Immunoelectron microscopy indicates that Hsp40 is localized in the distal portion of spoke stalk, possibly at the junction between spoke head and the stalk.\n
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\n \n\n \n \n Shiba, K., Ohmuro, J., Mogami, Y., Nishigaki, T., Wood, C. D., Darszon, A., Tatsu, Y., Yumoto, N., & Baba, S. A.\n\n\n \n \n \n \n \n Sperm-Activating Peptide Induces Asymmetric Flagellar Bending in Sea Urchin Sperm.\n \n \n \n \n\n\n \n\n\n\n Zoological Science, 22(3): 293–299. March 2005.\n \n\n\n\n
\n\n\n\n \n \n \"Sperm-ActivatingPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n  \n \n 3 downloads\n \n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{shiba_sperm-activating_2005,\n\ttitle = {Sperm-{Activating} {Peptide} {Induces} {Asymmetric} {Flagellar} {Bending} in {Sea} {Urchin} {Sperm}},\n\tvolume = {22},\n\tissn = {0289-0003},\n\turl = {http://www.bioone.org/doi/abs/10.2108/zsj.22.293},\n\tdoi = {10.2108/zsj.22.293},\n\tlanguage = {en},\n\tnumber = {3},\n\turldate = {2021-07-26},\n\tjournal = {Zoological Science},\n\tauthor = {Shiba, Kogiku and Ohmuro, Junko and Mogami, Yoshihiro and Nishigaki, Takuya and Wood, Christopher D. and Darszon, Alberto and Tatsu, Yoshiro and Yumoto, Noboru and Baba, Shoji A.},\n\tmonth = mar,\n\tyear = {2005},\n\tpages = {293--299},\n}\n\n
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\n \n\n \n \n 三上温子, 小松輝久, 青木優和, & 横濱康継\n\n\n \n \n \n \n 伊豆半島大浦湾におけるガラモ場の年間純生産量の推定.\n \n \n \n\n\n \n\n\n\n 月刊海洋, 37: 499–502. 2005.\n \n\n\n\n
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@article{__2005,\n\ttitle = {伊豆半島大浦湾におけるガラモ場の年間純生産量の推定},\n\tvolume = {37},\n\tjournal = {月刊海洋},\n\tauthor = {{三上温子} and {小松輝久} and {青木優和} and {横濱康継}},\n\tyear = {2005},\n\tpages = {499--502},\n}\n\n
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\n \n\n \n \n 小松輝久, Fillipi, J., 松永大輔, 三上温子, 佐川, 石田健一, 立川賢一, 鰺坂哲朗, 田中克彦, 青木優和, & 杉本隆成\n\n\n \n \n \n \n 東シナ海における流れ藻の分布.\n \n \n \n\n\n \n\n\n\n 月刊海洋, 37: 522–526. 2005.\n \n\n\n\n
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@article{__2005-1,\n\ttitle = {東シナ海における流れ藻の分布},\n\tvolume = {37},\n\tjournal = {月刊海洋},\n\tauthor = {{小松輝久} and Fillipi, J.B. and {松永大輔} and {三上温子} and {佐川} and {石田健一} and {立川賢一} and {鰺坂哲朗} and {田中克彦} and {青木優和} and {杉本隆成}},\n\tyear = {2005},\n\tpages = {522--526},\n}\n\n
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\n \n\n \n \n 柴小菊, & 吉田\n\n\n \n \n \n \n 卵由来物質によるホヤ精子の運動制御機構.\n \n \n \n\n\n \n\n\n\n 号外海洋, 41: 98–104. 2005.\n \n\n\n\n
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@article{__2005-2,\n\ttitle = {卵由来物質によるホヤ精子の運動制御機構},\n\tvolume = {41},\n\tjournal = {号外海洋},\n\tauthor = {{柴小菊} and {吉田}},\n\tyear = {2005},\n\tpages = {98--104},\n}\n\n
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\n \n\n \n \n 田中克彦, 青木優和, & 小松輝久\n\n\n \n \n \n \n 東シナ海で採集された流れ藻葉上性フクロエビ類について.\n \n \n \n\n\n \n\n\n\n 月刊海洋, 37: 527–531. 2005.\n \n\n\n\n
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@article{__2005-3,\n\ttitle = {東シナ海で採集された流れ藻葉上性フクロエビ類について},\n\tvolume = {37},\n\tjournal = {月刊海洋},\n\tauthor = {{田中克彦} and {青木優和} and {小松輝久}},\n\tyear = {2005},\n\tpages = {527--531},\n}\n\n
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\n \n\n \n \n 稲葉一男\n\n\n \n \n \n \n 境界動物の生物学—脊椎動物への進化の研究最前線—、ホヤ精巣における遺伝子発現とそれらの機能解析.\n \n \n \n\n\n \n\n\n\n 月刊海洋, 41: 89–97. 2005.\n \n\n\n\n
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@article{__2005-4,\n\ttitle = {境界動物の生物学—脊椎動物への進化の研究最前線—、ホヤ精巣における遺伝子発現とそれらの機能解析},\n\tvolume = {41},\n\tjournal = {月刊海洋},\n\tauthor = {{稲葉一男}},\n\tyear = {2005},\n\tpages = {89--97},\n}\n\n
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\n \n\n \n \n 青木優和, 田中克彦, & 小松輝久\n\n\n \n \n \n \n ホンダワラ類と葉上性端脚類の関係.\n \n \n \n\n\n \n\n\n\n 月刊海洋, 37: 503–508. 2005.\n \n\n\n\n
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@article{__2005-5,\n\ttitle = {ホンダワラ類と葉上性端脚類の関係},\n\tvolume = {37},\n\tjournal = {月刊海洋},\n\tauthor = {{青木優和} and {田中克彦} and {小松輝久}},\n\tyear = {2005},\n\tpages = {503--508},\n}\n\n
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