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\n \n\n \n \n Agostini, S., Harvey, B. P., Wada, S., Kon, K., Milazzo, M., Inaba, K., & Hall-Spencer, J. M.\n\n\n \n \n \n \n \n Ocean acidification drives community shifts towards simplified non-calcified habitats in a subtropical−temperate transition zone.\n \n \n \n \n\n\n \n\n\n\n Scientific Reports, 8(1): 11354. December 2018.\n \n\n\n\n
\n\n\n\n \n \n \"OceanPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n  \n \n 32 downloads\n \n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{agostini_ocean_2018,\n\ttitle = {Ocean acidification drives community shifts towards simplified non-calcified habitats in a subtropical−temperate transition zone},\n\tvolume = {8},\n\tissn = {2045-2322},\n\turl = {http://www.nature.com/articles/s41598-018-29251-7},\n\tdoi = {10.1038/s41598-018-29251-7},\n\tlanguage = {en},\n\tnumber = {1},\n\turldate = {2021-07-27},\n\tjournal = {Scientific Reports},\n\tauthor = {Agostini, Sylvain and Harvey, Ben P. and Wada, Shigeki and Kon, Koetsu and Milazzo, Marco and Inaba, Kazuo and Hall-Spencer, Jason M.},\n\tmonth = dec,\n\tyear = {2018},\n\tpages = {11354},\n}\n\n
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\n \n\n \n \n Arai, K., Wada, S., Shimotori, K., Omori, Y., & Hama, T.\n\n\n \n \n \n \n \n Production and degradation of fluorescent dissolved organic matter derived from bacteria.\n \n \n \n \n\n\n \n\n\n\n Journal of Oceanography, 74(1): 39–52. February 2018.\n \n\n\n\n
\n\n\n\n \n \n \"ProductionPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{arai_production_2018,\n\ttitle = {Production and degradation of fluorescent dissolved organic matter derived from bacteria},\n\tvolume = {74},\n\tissn = {0916-8370, 1573-868X},\n\turl = {http://link.springer.com/10.1007/s10872-017-0436-y},\n\tdoi = {10.1007/s10872-017-0436-y},\n\tlanguage = {en},\n\tnumber = {1},\n\turldate = {2021-07-27},\n\tjournal = {Journal of Oceanography},\n\tauthor = {Arai, Ken and Wada, Shigeki and Shimotori, Koichi and Omori, Yuko and Hama, Takeo},\n\tmonth = feb,\n\tyear = {2018},\n\tpages = {39--52},\n}\n\n
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\n \n\n \n \n Brown, N. E. M., Milazzo, M., Rastrick, S. P. S., Hall-Spencer, J. M., Therriault, T. W., & Harley, C. D. G.\n\n\n \n \n \n \n \n Natural acidification changes the timing and rate of succession, alters community structure, and increases homogeneity in marine biofouling communities.\n \n \n \n \n\n\n \n\n\n\n Global Change Biology, 24(1): e112–e127. January 2018.\n \n\n\n\n
\n\n\n\n \n \n \"NaturalPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{brown_natural_2018,\n\ttitle = {Natural acidification changes the timing and rate of succession, alters community structure, and increases homogeneity in marine biofouling communities},\n\tvolume = {24},\n\tissn = {13541013},\n\turl = {https://onlinelibrary.wiley.com/doi/10.1111/gcb.13856},\n\tdoi = {10.1111/gcb.13856},\n\tlanguage = {en},\n\tnumber = {1},\n\turldate = {2021-07-27},\n\tjournal = {Global Change Biology},\n\tauthor = {Brown, Norah E. M. and Milazzo, Marco and Rastrick, Samuel P. S. and Hall-Spencer, Jason M. and Therriault, Thomas W. and Harley, Christopher D. G.},\n\tmonth = jan,\n\tyear = {2018},\n\tpages = {e112--e127},\n}\n\n
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\n \n\n \n \n Castro, M. C. T. d., Veldhuis, M. J., Fileman, T. W., & Hall-Spencer, J. M.\n\n\n \n \n \n \n \n Different approaches and limitations for testing phytoplankton viability in natural assemblies and treated ballast water.\n \n \n \n \n\n\n \n\n\n\n Marine Pollution Bulletin, 137: 172–179. December 2018.\n \n\n\n\n
\n\n\n\n \n \n \"DifferentPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n  \n \n 4 downloads\n \n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{castro_different_2018,\n\ttitle = {Different approaches and limitations for testing phytoplankton viability in natural assemblies and treated ballast water},\n\tvolume = {137},\n\tissn = {0025326X},\n\turl = {https://linkinghub.elsevier.com/retrieve/pii/S0025326X1830715X},\n\tdoi = {10.1016/j.marpolbul.2018.10.013},\n\tlanguage = {en},\n\turldate = {2021-07-27},\n\tjournal = {Marine Pollution Bulletin},\n\tauthor = {Castro, Maria Cecilia T. de and Veldhuis, Marcel J.W. and Fileman, Timothy W. and Hall-Spencer, Jason M.},\n\tmonth = dec,\n\tyear = {2018},\n\tpages = {172--179},\n}\n\n
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\n \n\n \n \n Castro, M. C. T., Hall-Spencer, J. M., Poggian, C. F., & Fileman, T. W.\n\n\n \n \n \n \n \n Ten years of Brazilian ballast water management.\n \n \n \n \n\n\n \n\n\n\n Journal of Sea Research, 133: 36–42. March 2018.\n \n\n\n\n
\n\n\n\n \n \n \"TenPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n  \n \n 4 downloads\n \n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{castro_ten_2018,\n\ttitle = {Ten years of {Brazilian} ballast water management},\n\tvolume = {133},\n\tissn = {13851101},\n\turl = {https://linkinghub.elsevier.com/retrieve/pii/S1385110116302258},\n\tdoi = {10.1016/j.seares.2017.02.003},\n\tlanguage = {en},\n\turldate = {2021-07-27},\n\tjournal = {Journal of Sea Research},\n\tauthor = {Castro, Maria Cecilia Trindade and Hall-Spencer, Jason M. and Poggian, Cecília Fonseca and Fileman, Timothy W.},\n\tmonth = mar,\n\tyear = {2018},\n\tpages = {36--42},\n}\n\n
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\n \n\n \n \n Harvey, B. P., Agostini, S., Wada, S., Inaba, K., & Hall-Spencer, J. M.\n\n\n \n \n \n \n \n Dissolution: The Achilles’ Heel of the Triton Shell in an Acidifying Ocean.\n \n \n \n \n\n\n \n\n\n\n Frontiers in Marine Science, 5: 371. October 2018.\n \n\n\n\n
\n\n\n\n \n \n \"Dissolution:Paper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n  \n \n 31 downloads\n \n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{harvey_dissolution_2018,\n\ttitle = {Dissolution: {The} {Achilles}’ {Heel} of the {Triton} {Shell} in an {Acidifying} {Ocean}},\n\tvolume = {5},\n\tissn = {2296-7745},\n\tshorttitle = {Dissolution},\n\turl = {https://www.frontiersin.org/article/10.3389/fmars.2018.00371/full},\n\tdoi = {10.3389/fmars.2018.00371},\n\turldate = {2021-07-27},\n\tjournal = {Frontiers in Marine Science},\n\tauthor = {Harvey, Ben P. and Agostini, Sylvain and Wada, Shigeki and Inaba, Kazuo and Hall-Spencer, Jason M.},\n\tmonth = oct,\n\tyear = {2018},\n\tpages = {371},\n}\n\n
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\n \n\n \n \n Hill, R. W., Armstrong, E. J., Inaba, K., Morita, M., Tresguerres, M., Stillman, J. H., Roa, J. N., & Kwan, G. T.\n\n\n \n \n \n \n \n Acid secretion by the boring organ of the burrowing giant clam, Tridacna crocea.\n \n \n \n \n\n\n \n\n\n\n Biology Letters, 14(6): 20180047. June 2018.\n \n\n\n\n
\n\n\n\n \n \n \"AcidPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n  \n \n abstract \n \n\n \n  \n \n 4 downloads\n \n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{hill_acid_2018,\n\ttitle = {Acid secretion by the boring organ of the burrowing giant clam, \\textit{{Tridacna} crocea}},\n\tvolume = {14},\n\tissn = {1744-9561, 1744-957X},\n\turl = {https://royalsocietypublishing.org/doi/10.1098/rsbl.2018.0047},\n\tdoi = {10.1098/rsbl.2018.0047},\n\tabstract = {The giant clam\n              Tridacna crocea\n              , native to Indo-Pacific coral reefs, is noted for its unique ability to bore fully into coral rock and is a major agent of reef bioerosion. However,\n              T. crocea\n              's mechanism of boring has remained a mystery despite decades of research. By exploiting a new, two-dimensional pH-sensing technology and manipulating clams to press their presumptive boring tissue (the pedal mantle) against pH-sensing foils, we show that this tissue lowers the pH of surfaces it contacts by greater than or equal to 2 pH units below seawater pH day and night. Acid secretion is likely mediated by vacuolar-type H\n              +\n              -ATPase, which we demonstrate (by immunofluorescence) is abundant in the pedal mantle outer epithelium. Our discovery of acid secretion solves this decades-old mystery and reveals that, during bioerosion,\n              T. crocea\n              can liberate reef constituents directly to the soluble phase, rather than producing sediment alone as earlier assumed.},\n\tlanguage = {en},\n\tnumber = {6},\n\turldate = {2021-07-27},\n\tjournal = {Biology Letters},\n\tauthor = {Hill, Richard W. and Armstrong, Eric J. and Inaba, Kazuo and Morita, Masaya and Tresguerres, Martin and Stillman, Jonathon H. and Roa, Jinae N. and Kwan, Garfield T.},\n\tmonth = jun,\n\tyear = {2018},\n\tpages = {20180047},\n}\n\n
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\n The giant clam Tridacna crocea , native to Indo-Pacific coral reefs, is noted for its unique ability to bore fully into coral rock and is a major agent of reef bioerosion. However, T. crocea 's mechanism of boring has remained a mystery despite decades of research. By exploiting a new, two-dimensional pH-sensing technology and manipulating clams to press their presumptive boring tissue (the pedal mantle) against pH-sensing foils, we show that this tissue lowers the pH of surfaces it contacts by greater than or equal to 2 pH units below seawater pH day and night. Acid secretion is likely mediated by vacuolar-type H + -ATPase, which we demonstrate (by immunofluorescence) is abundant in the pedal mantle outer epithelium. Our discovery of acid secretion solves this decades-old mystery and reveals that, during bioerosion, T. crocea can liberate reef constituents directly to the soluble phase, rather than producing sediment alone as earlier assumed.\n
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\n \n\n \n \n Horie, R., Hazbun, A., Chen, K., Cao, C., Levine, M., & Horie, T.\n\n\n \n \n \n \n \n Shared evolutionary origin of vertebrate neural crest and cranial placodes.\n \n \n \n \n\n\n \n\n\n\n Nature, 560(7717): 228–232. August 2018.\n \n\n\n\n
\n\n\n\n \n \n \"SharedPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{horie_shared_2018,\n\ttitle = {Shared evolutionary origin of vertebrate neural crest and cranial placodes},\n\tvolume = {560},\n\tissn = {0028-0836, 1476-4687},\n\turl = {http://www.nature.com/articles/s41586-018-0385-7},\n\tdoi = {10.1038/s41586-018-0385-7},\n\tlanguage = {en},\n\tnumber = {7717},\n\turldate = {2021-07-27},\n\tjournal = {Nature},\n\tauthor = {Horie, Ryoko and Hazbun, Alex and Chen, Kai and Cao, Chen and Levine, Michael and Horie, Takeo},\n\tmonth = aug,\n\tyear = {2018},\n\tpages = {228--232},\n}\n\n
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\n \n\n \n \n Horie, T., Horie, R., Chen, K., Cao, C., Nakagawa, M., Kusakabe, T. G., Satoh, N., Sasakura, Y., & Levine, M.\n\n\n \n \n \n \n \n Regulatory cocktail for dopaminergic neurons in a protovertebrate identified by whole-embryo single-cell transcriptomics.\n \n \n \n \n\n\n \n\n\n\n Genes & Development, 32(19-20): 1297–1302. October 2018.\n \n\n\n\n
\n\n\n\n \n \n \"RegulatoryPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{horie_regulatory_2018,\n\ttitle = {Regulatory cocktail for dopaminergic neurons in a protovertebrate identified by whole-embryo single-cell transcriptomics},\n\tvolume = {32},\n\tissn = {0890-9369, 1549-5477},\n\turl = {http://genesdev.cshlp.org/lookup/doi/10.1101/gad.317669.118},\n\tdoi = {10.1101/gad.317669.118},\n\tlanguage = {en},\n\tnumber = {19-20},\n\turldate = {2021-07-27},\n\tjournal = {Genes \\& Development},\n\tauthor = {Horie, Takeo and Horie, Ryoko and Chen, Kai and Cao, Chen and Nakagawa, Masashi and Kusakabe, Takehiro G. and Satoh, Noriyuki and Sasakura, Yasunori and Levine, Michael},\n\tmonth = oct,\n\tyear = {2018},\n\tpages = {1297--1302},\n}\n\n
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\n \n\n \n \n Inaba, K.\n\n\n \n \n \n \n \n Biochemical purification of axonemal and cytoplasmic dyneins.\n \n \n \n \n\n\n \n\n\n\n In Dyneins, pages 88–111. Elsevier, 2018.\n \n\n\n\n
\n\n\n\n \n \n \"BiochemicalPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@incollection{inaba_biochemical_2018,\n\ttitle = {Biochemical purification of axonemal and cytoplasmic dyneins},\n\tisbn = {978-0-12-809470-9},\n\turl = {https://linkinghub.elsevier.com/retrieve/pii/B9780128094709000047},\n\tlanguage = {en},\n\turldate = {2021-07-27},\n\tbooktitle = {Dyneins},\n\tpublisher = {Elsevier},\n\tauthor = {Inaba, Kazuo},\n\tyear = {2018},\n\tdoi = {10.1016/B978-0-12-809470-9.00004-7},\n\tpages = {88--111},\n}\n\n
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\n \n\n \n \n Inaba, K., & Shiba, K.\n\n\n \n \n \n \n \n Microscopic analysis of sperm movement: links to mechanisms and protein components.\n \n \n \n \n\n\n \n\n\n\n Microscopy, 67(3): 144–155. June 2018.\n \n\n\n\n
\n\n\n\n \n \n \"MicroscopicPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{inaba_microscopic_2018,\n\ttitle = {Microscopic analysis of sperm movement: links to mechanisms and protein components},\n\tvolume = {67},\n\tissn = {2050-5698, 2050-5701},\n\tshorttitle = {Microscopic analysis of sperm movement},\n\turl = {https://academic.oup.com/jmicro/article/67/3/144/4993734},\n\tdoi = {10.1093/jmicro/dfy021},\n\tlanguage = {en},\n\tnumber = {3},\n\turldate = {2021-07-27},\n\tjournal = {Microscopy},\n\tauthor = {Inaba, Kazuo and Shiba, Kogiku},\n\tmonth = jun,\n\tyear = {2018},\n\tpages = {144--155},\n}\n\n
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\n \n\n \n \n Kamiya, R., Shiba, K., Inaba, K., & Kato-Minoura, T.\n\n\n \n \n \n \n \n Release of Sticky Glycoproteins from Chlamydomonas Flagella During Microsphere Translocation on the Surface Membrane.\n \n \n \n \n\n\n \n\n\n\n Zoological Science, 35(4): 299. August 2018.\n \n\n\n\n
\n\n\n\n \n \n \"ReleasePaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{kamiya_release_2018,\n\ttitle = {Release of {Sticky} {Glycoproteins} from \\textit{{Chlamydomonas} {Flagella}} {During} {Microsphere} {Translocation} on the {Surface} {Membrane}},\n\tvolume = {35},\n\tissn = {0289-0003},\n\turl = {https://bioone.org/journals/zoological-science/volume-35/issue-4/zs180025/Release-of-Sticky-Glycoproteins-from-Chlamydomonas-Flagella-During-Microsphere-Translocation/10.2108/zs180025.full},\n\tdoi = {10.2108/zs180025},\n\tnumber = {4},\n\turldate = {2021-07-27},\n\tjournal = {Zoological Science},\n\tauthor = {Kamiya, Ritsu and Shiba, Kogiku and Inaba, Kazuo and Kato-Minoura, Takako},\n\tmonth = aug,\n\tyear = {2018},\n\tpages = {299},\n}\n\n
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\n \n\n \n \n Kinjo, S., Kiyomoto, M., Yamamoto, T., Ikeo, K., & Yaguchi, S.\n\n\n \n \n \n \n \n HpBase: A genome database of a sea urchin, Hemicentrotus pulcherrimus.\n \n \n \n \n\n\n \n\n\n\n Development, Growth & Differentiation, 60(3): 174–182. April 2018.\n \n\n\n\n
\n\n\n\n \n \n \"HpBase:Paper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{kinjo_hpbase_2018,\n\ttitle = {{HpBase}: {A} genome database of a sea urchin, \\textit{{Hemicentrotus} pulcherrimus}},\n\tvolume = {60},\n\tissn = {00121592},\n\tshorttitle = {{HpBase}},\n\turl = {https://onlinelibrary.wiley.com/doi/10.1111/dgd.12429},\n\tdoi = {10.1111/dgd.12429},\n\tlanguage = {en},\n\tnumber = {3},\n\turldate = {2021-07-27},\n\tjournal = {Development, Growth \\& Differentiation},\n\tauthor = {Kinjo, Sonoko and Kiyomoto, Masato and Yamamoto, Takashi and Ikeo, Kazuho and Yaguchi, Shunsuke},\n\tmonth = apr,\n\tyear = {2018},\n\tpages = {174--182},\n}\n\n
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\n \n\n \n \n Kletou, D., Kleitou, P., Savva, I., Attrill, M. J., Antoniou, C., & Hall-Spencer, J. M.\n\n\n \n \n \n \n \n Seagrass recovery after fish farm relocation in the eastern Mediterranean.\n \n \n \n \n\n\n \n\n\n\n Marine Environmental Research, 140: 221–233. September 2018.\n \n\n\n\n
\n\n\n\n \n \n \"SeagrassPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n  \n \n 4 downloads\n \n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{kletou_seagrass_2018,\n\ttitle = {Seagrass recovery after fish farm relocation in the eastern {Mediterranean}},\n\tvolume = {140},\n\tissn = {01411136},\n\turl = {https://linkinghub.elsevier.com/retrieve/pii/S0141113618301831},\n\tdoi = {10.1016/j.marenvres.2018.06.007},\n\tlanguage = {en},\n\turldate = {2021-07-27},\n\tjournal = {Marine Environmental Research},\n\tauthor = {Kletou, Demetris and Kleitou, Periklis and Savva, Ioannis and Attrill, Martin J. and Antoniou, Charalampos and Hall-Spencer, Jason M.},\n\tmonth = sep,\n\tyear = {2018},\n\tpages = {221--233},\n}\n\n
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\n \n\n \n \n Kletou, D., Savva, I., Tsiamis, K., & Hall-Spencer, J. M.\n\n\n \n \n \n \n \n Opportunistic seaweeds replace Cystoseira forests on an industrialised coast in Cyprus.\n \n \n \n \n\n\n \n\n\n\n Mediterranean Marine Science, 19(3): 598. July 2018.\n \n\n\n\n
\n\n\n\n \n \n \"OpportunisticPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n  \n \n abstract \n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{kletou_opportunistic_2018,\n\ttitle = {Opportunistic seaweeds replace \\textit{{Cystoseira}} forests on an industrialised coast in {Cyprus}},\n\tvolume = {19},\n\tissn = {1791-6763, 1108-393X},\n\turl = {https://ejournals.epublishing.ekt.gr/index.php/hcmr-med-mar-sc/article/view/16891},\n\tdoi = {10.12681/mms.16891},\n\tabstract = {Seaweeds are affected by humans worldwide, although no studies have assessed this in Cyprus. The Water Framework Directive requires ecological assessments of European coastal waters with biological indicators. We investigated macroalgal community metrics in the upper subtidal across ca 10 km of shoreline, encompassing undeveloped areas with limited human access as well as the most industrialised and impacted coast of Cyprus (Vasiliko Bay). Quadrats (20 x 20cm) were used to survey the algal communities in summer 2012 and spring 2013. Of the 51 taxa, we recorded, Cladophora nigrescens and Laurencia caduciramulosa (a non-native species) are new records for Cyprus. Brown algae of the genus Cystoseira, e.g., Cystoseira barbatula, formed dense forests covering rocky substrata on shorelines with limited human access. Cystoseira decreased in abundance around bathing waters and was very rare in heavily industrialised parts of the bay. In impacted areas, fleshy and filamentous opportunistic species such as opportunistic Ulva and Chaetomorpha species with lower biomass than perennial species, proliferated in spring. The Ecological Evaluation Index (EEI-c) we used was a robust biotic index reflecting anthropogenic stress. Without improved management, the Marine Strategy Framework Directive targets may not be met on some coastlines of Cyprus since seaweed forests are in decline and are further threatened by imminent development.},\n\tnumber = {3},\n\turldate = {2021-07-27},\n\tjournal = {Mediterranean Marine Science},\n\tauthor = {Kletou, Demetris and Savva, Ioannis and Tsiamis, Konstantinos and Hall-Spencer, Jason M.},\n\tmonth = jul,\n\tyear = {2018},\n\tpages = {598},\n}\n\n
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\n Seaweeds are affected by humans worldwide, although no studies have assessed this in Cyprus. The Water Framework Directive requires ecological assessments of European coastal waters with biological indicators. We investigated macroalgal community metrics in the upper subtidal across ca 10 km of shoreline, encompassing undeveloped areas with limited human access as well as the most industrialised and impacted coast of Cyprus (Vasiliko Bay). Quadrats (20 x 20cm) were used to survey the algal communities in summer 2012 and spring 2013. Of the 51 taxa, we recorded, Cladophora nigrescens and Laurencia caduciramulosa (a non-native species) are new records for Cyprus. Brown algae of the genus Cystoseira, e.g., Cystoseira barbatula, formed dense forests covering rocky substrata on shorelines with limited human access. Cystoseira decreased in abundance around bathing waters and was very rare in heavily industrialised parts of the bay. In impacted areas, fleshy and filamentous opportunistic species such as opportunistic Ulva and Chaetomorpha species with lower biomass than perennial species, proliferated in spring. The Ecological Evaluation Index (EEI-c) we used was a robust biotic index reflecting anthropogenic stress. Without improved management, the Marine Strategy Framework Directive targets may not be met on some coastlines of Cyprus since seaweed forests are in decline and are further threatened by imminent development.\n
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\n \n\n \n \n Kohtsuka, H., Tsuchiya, Y., & Nakano, H.\n\n\n \n \n \n \n \n First report of live Balanometra balanoides (Echinodermata: Crinoidea), with observations on its coloration, collected from the Sagami Sea.\n \n \n \n \n\n\n \n\n\n\n Biogeography, 20: 41–44. 2018.\n \n\n\n\n
\n\n\n\n \n \n \"FirstPaper\n  \n \n\n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{kohtsuka_first_2018,\n\ttitle = {First report of live \\textit{{Balanometra} balanoides} ({Echinodermata}: {Crinoidea}), with observations on its coloration, collected from the {Sagami} {Sea}},\n\tvolume = {20},\n\tshorttitle = {First report of live {Balanometra} balanoides ({Echinodermata}},\n\turl = {https://doi.org/10.11358/biogeo.20.41},\n\tlanguage = {en},\n\turldate = {2021-08-02},\n\tjournal = {Biogeography},\n\tauthor = {Kohtsuka, Hisanori and Tsuchiya, Yasutaka and Nakano, Hiroaki},\n\tyear = {2018},\n\tpages = {41--44},\n}\n\n
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\n \n\n \n \n Langer, G., Sadekov, A., Nehrke, G., Baggini, C., Rodolfo-Metalpa, R., Hall-Spencer, J. M., Cuoco, E., Bijma, J., & Elderfield, H.\n\n\n \n \n \n \n \n Relationship between mineralogy and minor element partitioning in limpets from an Ischia CO$_{\\textrm{2}}$ vent site provides new insights into their biomineralization pathway.\n \n \n \n \n\n\n \n\n\n\n Geochimica et Cosmochimica Acta, 236: 218–229. September 2018.\n \n\n\n\n
\n\n\n\n \n \n \"RelationshipPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{langer_relationship_2018,\n\ttitle = {Relationship between mineralogy and minor element partitioning in limpets from an {Ischia} {CO}$_{\\textrm{2}}$ vent site provides new insights into their biomineralization pathway},\n\tvolume = {236},\n\tissn = {00167037},\n\turl = {https://linkinghub.elsevier.com/retrieve/pii/S0016703718301340},\n\tdoi = {10.1016/j.gca.2018.02.044},\n\tlanguage = {en},\n\turldate = {2021-07-27},\n\tjournal = {Geochimica et Cosmochimica Acta},\n\tauthor = {Langer, Gerald and Sadekov, Aleksey and Nehrke, Gernot and Baggini, Cecilia and Rodolfo-Metalpa, Riccardo and Hall-Spencer, Jason M. and Cuoco, Emilio and Bijma, Jelle and Elderfield, Henry},\n\tmonth = sep,\n\tyear = {2018},\n\tpages = {218--229},\n}\n\n
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\n \n\n \n \n Lemasson, A. J., Hall-Spencer, J. M., Fletcher, S., Provstgaard-Morys, S., & Knights, A. M.\n\n\n \n \n \n \n \n Indications of future performance of native and non-native adult oysters under acidification and warming.\n \n \n \n \n\n\n \n\n\n\n Marine Environmental Research, 142: 178–189. November 2018.\n \n\n\n\n
\n\n\n\n \n \n \"IndicationsPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n  \n \n 4 downloads\n \n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{lemasson_indications_2018,\n\ttitle = {Indications of future performance of native and non-native adult oysters under acidification and warming},\n\tvolume = {142},\n\tissn = {01411136},\n\turl = {https://linkinghub.elsevier.com/retrieve/pii/S0141113618304422},\n\tdoi = {10.1016/j.marenvres.2018.10.003},\n\tlanguage = {en},\n\turldate = {2021-07-27},\n\tjournal = {Marine Environmental Research},\n\tauthor = {Lemasson, Anaëlle J. and Hall-Spencer, Jason M. and Fletcher, Stephen and Provstgaard-Morys, Samuel and Knights, Antony M.},\n\tmonth = nov,\n\tyear = {2018},\n\tpages = {178--189},\n}\n\n
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\n \n\n \n \n Miyazawa, H., & Nakano, H.\n\n\n \n \n \n \n \n Multiple surveys employing a new sample-processing protocol reveal the genetic diversity of placozoans in Japan.\n \n \n \n \n\n\n \n\n\n\n Ecology and Evolution, 8(5): 2407–2417. March 2018.\n \n\n\n\n
\n\n\n\n \n \n \"MultiplePaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{miyazawa_multiple_2018,\n\ttitle = {Multiple surveys employing a new sample-processing protocol reveal the genetic diversity of placozoans in {Japan}},\n\tvolume = {8},\n\tissn = {20457758},\n\turl = {https://onlinelibrary.wiley.com/doi/10.1002/ece3.3861},\n\tdoi = {10.1002/ece3.3861},\n\tlanguage = {en},\n\tnumber = {5},\n\turldate = {2021-07-27},\n\tjournal = {Ecology and Evolution},\n\tauthor = {Miyazawa, Hideyuki and Nakano, Hiroaki},\n\tmonth = mar,\n\tyear = {2018},\n\tpages = {2407--2417},\n}\n\n
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\n \n\n \n \n Mizotani, Y., Suzuki, M., Hotta, K., Watanabe, H., Shiba, K., Inaba, K., Tashiro, E., Oka, K., & Imoto, M.\n\n\n \n \n \n \n \n 14-3-3εa directs the pulsatile transport of basal factors toward the apical domain for lumen growth in tubulogenesis.\n \n \n \n \n\n\n \n\n\n\n Proceedings of the National Academy of Sciences, 115(38): E8873–E8881. September 2018.\n \n\n\n\n
\n\n\n\n \n \n \"14-3-3εaPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n  \n \n abstract \n \n\n \n  \n \n 4 downloads\n \n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{mizotani_14-3-3directs_2018,\n\ttitle = {14-3-3εa directs the pulsatile transport of basal factors toward the apical domain for lumen growth in tubulogenesis},\n\tvolume = {115},\n\tissn = {0027-8424, 1091-6490},\n\turl = {http://www.pnas.org/lookup/doi/10.1073/pnas.1808756115},\n\tdoi = {10.1073/pnas.1808756115},\n\tabstract = {The\n              Ciona\n              notochord has emerged as a simple and tractable in vivo model for tubulogenesis. Here, using a chemical genetics approach, we identified UTKO1 as a selective small molecule inhibitor of notochord tubulogenesis. We identified 14-3-3εa protein as a direct binding partner of UTKO1 and showed that 14-3-3εa knockdown leads to failure of notochord tubulogenesis. We found that UTKO1 prevents 14-3-3εa from interacting with ezrin/radixin/moesin (ERM), which is required for notochord tubulogenesis, suggesting that interactions between 14-3-3εa and ERM play a key role in regulating the early steps of tubulogenesis. Using live imaging, we found that, as lumens begin to open between neighboring cells, 14-3-3εa and ERM are highly colocalized at the basal cortex where they undergo cycles of accumulation and disappearance. Interestingly, the disappearance of 14-3-3εa and ERM during each cycle is tightly correlated with a transient flow of 14-3-3εa, ERM, myosin II, and other cytoplasmic elements from the basal surface toward the lumen-facing apical domain, which is often accompanied by visible changes in lumen architecture. Both pulsatile flow and lumen formation are abolished in larvae treated with UTKO1, in larvae depleted of either 14-3-3εa or ERM, or in larvae expressing a truncated form of 14-3-3εa that lacks the ability to interact with ERM. These results suggest that 14-3-3εa and ERM interact at the basal cortex to direct pulsatile basal accumulation and basal–apical transport of factors that are essential for lumen formation. We propose that similar mechanisms may underlie or may contribute to lumen formation in tubulogenesis in other systems.},\n\tlanguage = {en},\n\tnumber = {38},\n\turldate = {2021-07-27},\n\tjournal = {Proceedings of the National Academy of Sciences},\n\tauthor = {Mizotani, Yuji and Suzuki, Mayu and Hotta, Kohji and Watanabe, Hidenori and Shiba, Kogiku and Inaba, Kazuo and Tashiro, Etsu and Oka, Kotaro and Imoto, Masaya},\n\tmonth = sep,\n\tyear = {2018},\n\tpages = {E8873--E8881},\n}\n\n
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\n The Ciona notochord has emerged as a simple and tractable in vivo model for tubulogenesis. Here, using a chemical genetics approach, we identified UTKO1 as a selective small molecule inhibitor of notochord tubulogenesis. We identified 14-3-3εa protein as a direct binding partner of UTKO1 and showed that 14-3-3εa knockdown leads to failure of notochord tubulogenesis. We found that UTKO1 prevents 14-3-3εa from interacting with ezrin/radixin/moesin (ERM), which is required for notochord tubulogenesis, suggesting that interactions between 14-3-3εa and ERM play a key role in regulating the early steps of tubulogenesis. Using live imaging, we found that, as lumens begin to open between neighboring cells, 14-3-3εa and ERM are highly colocalized at the basal cortex where they undergo cycles of accumulation and disappearance. Interestingly, the disappearance of 14-3-3εa and ERM during each cycle is tightly correlated with a transient flow of 14-3-3εa, ERM, myosin II, and other cytoplasmic elements from the basal surface toward the lumen-facing apical domain, which is often accompanied by visible changes in lumen architecture. Both pulsatile flow and lumen formation are abolished in larvae treated with UTKO1, in larvae depleted of either 14-3-3εa or ERM, or in larvae expressing a truncated form of 14-3-3εa that lacks the ability to interact with ERM. These results suggest that 14-3-3εa and ERM interact at the basal cortex to direct pulsatile basal accumulation and basal–apical transport of factors that are essential for lumen formation. We propose that similar mechanisms may underlie or may contribute to lumen formation in tubulogenesis in other systems.\n
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\n \n\n \n \n Momose, T., De Cian, A., Shiba, K., Inaba, K., Giovannangeli, C., & Concordet, J.\n\n\n \n \n \n \n \n High doses of CRISPR/Cas9 ribonucleoprotein efficiently induce gene knockout with low mosaicism in the hydrozoan Clytia hemisphaerica through microhomology-mediated deletion.\n \n \n \n \n\n\n \n\n\n\n Scientific Reports, 8(1): 11734. December 2018.\n \n\n\n\n
\n\n\n\n \n \n \"HighPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{momose_high_2018,\n\ttitle = {High doses of {CRISPR}/{Cas9} ribonucleoprotein efficiently induce gene knockout with low mosaicism in the hydrozoan \\textit{{Clytia} hemisphaerica} through microhomology-mediated deletion},\n\tvolume = {8},\n\tissn = {2045-2322},\n\turl = {http://www.nature.com/articles/s41598-018-30188-0},\n\tdoi = {10.1038/s41598-018-30188-0},\n\tlanguage = {en},\n\tnumber = {1},\n\turldate = {2021-07-27},\n\tjournal = {Scientific Reports},\n\tauthor = {Momose, Tsuyoshi and De Cian, Anne and Shiba, Kogiku and Inaba, Kazuo and Giovannangeli, Carine and Concordet, Jean-Paul},\n\tmonth = dec,\n\tyear = {2018},\n\tpages = {11734},\n}\n\n
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\n \n\n \n \n Morita, N., Inaba, K., & Saito, Y.\n\n\n \n \n \n \n \n Post-Embryonic Development and Genital-Complex Formation in Three Species of Polyclad Flatworms.\n \n \n \n \n\n\n \n\n\n\n Zoological Science, 35(1): 28. January 2018.\n \n\n\n\n
\n\n\n\n \n \n \"Post-EmbryonicPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n  \n \n 4 downloads\n \n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{morita_post-embryonic_2018,\n\ttitle = {Post-{Embryonic} {Development} and {Genital}-{Complex} {Formation} in {Three} {Species} of {Polyclad} {Flatworms}},\n\tvolume = {35},\n\tissn = {0289-0003},\n\turl = {https://bioone.org/journals/zoological-science/volume-35/issue-1/zs170114/Post-Embryonic-Development-and-Genital-Complex-Formation-in-Three-Species/10.2108/zs170114.full},\n\tdoi = {10.2108/zs170114},\n\tnumber = {1},\n\turldate = {2021-07-27},\n\tjournal = {Zoological Science},\n\tauthor = {Morita, Nozomi and Inaba, Kazuo and Saito, Yasunori},\n\tmonth = jan,\n\tyear = {2018},\n\tpages = {28},\n}\n\n
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\n \n\n \n \n Sasakura, Y.\n\n\n \n \n \n \n \n The Enhancer Trap in Ciona.\n \n \n \n \n\n\n \n\n\n\n In Sasakura, Y., editor(s), Transgenic Ascidians, volume 1029, pages 121–129. Springer Singapore, Singapore, 2018.\n Series Title: Advances in Experimental Medicine and Biology\n\n\n\n
\n\n\n\n \n \n \"ThePaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@incollection{sasakura_enhancer_2018,\n\taddress = {Singapore},\n\ttitle = {The {Enhancer} {Trap} in \\textit{{Ciona}}},\n\tvolume = {1029},\n\tisbn = {978-981-10-7544-5 978-981-10-7545-2},\n\turl = {http://link.springer.com/10.1007/978-981-10-7545-2_11},\n\turldate = {2021-07-27},\n\tbooktitle = {Transgenic {Ascidians}},\n\tpublisher = {Springer Singapore},\n\tauthor = {Sasakura, Yasunori},\n\teditor = {Sasakura, Yasunori},\n\tyear = {2018},\n\tdoi = {10.1007/978-981-10-7545-2_11},\n\tnote = {Series Title: Advances in Experimental Medicine and Biology},\n\tpages = {121--129},\n}\n\n
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\n \n\n \n \n Sasakura, Y.\n\n\n \n \n \n \n \n Germline Transgenesis in Ciona.\n \n \n \n \n\n\n \n\n\n\n In Sasakura, Y., editor(s), Transgenic Ascidians, volume 1029, pages 109–119. Springer Singapore, Singapore, 2018.\n Series Title: Advances in Experimental Medicine and Biology\n\n\n\n
\n\n\n\n \n \n \"GermlinePaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@incollection{sasakura_germline_2018,\n\taddress = {Singapore},\n\ttitle = {Germline {Transgenesis} in \\textit{{Ciona}}},\n\tvolume = {1029},\n\tisbn = {978-981-10-7544-5 978-981-10-7545-2},\n\turl = {http://link.springer.com/10.1007/978-981-10-7545-2_10},\n\turldate = {2021-07-27},\n\tbooktitle = {Transgenic {Ascidians}},\n\tpublisher = {Springer Singapore},\n\tauthor = {Sasakura, Yasunori},\n\teditor = {Sasakura, Yasunori},\n\tyear = {2018},\n\tdoi = {10.1007/978-981-10-7545-2_10},\n\tnote = {Series Title: Advances in Experimental Medicine and Biology},\n\tpages = {109--119},\n}\n\n
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\n \n\n \n \n Sasakura, Y.\n\n\n \n \n \n \n \n Cellulose production and the evolution of the sessile lifestyle in ascidians.\n \n \n \n \n\n\n \n\n\n\n Sessile Organisms, 35(2): 21–29. July 2018.\n \n\n\n\n
\n\n\n\n \n \n \"CellulosePaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n  \n \n 10 downloads\n \n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{sasakura_cellulose_2018,\n\ttitle = {Cellulose production and the evolution of the sessile lifestyle in ascidians},\n\tvolume = {35},\n\tissn = {1342-4181, 1883-4701},\n\turl = {https://www.jstage.jst.go.jp/article/sosj/35/2/35_350201/_article},\n\tdoi = {10.4282/sosj.35.21},\n\tlanguage = {en},\n\tnumber = {2},\n\turldate = {2021-07-27},\n\tjournal = {Sessile Organisms},\n\tauthor = {Sasakura, Yasunori},\n\tmonth = jul,\n\tyear = {2018},\n\tpages = {21--29},\n}\n\n
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\n \n\n \n \n Sasakura, Y., & Hozumi, A.\n\n\n \n \n \n \n \n Formation of adult organs through metamorphosis in ascidians.\n \n \n \n \n\n\n \n\n\n\n WIREs Developmental Biology, 7(2). March 2018.\n \n\n\n\n
\n\n\n\n \n \n \"FormationPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{sasakura_formation_2018,\n\ttitle = {Formation of adult organs through metamorphosis in ascidians},\n\tvolume = {7},\n\tissn = {1759-7684, 1759-7692},\n\turl = {https://onlinelibrary.wiley.com/doi/10.1002/wdev.304},\n\tdoi = {10.1002/wdev.304},\n\tlanguage = {en},\n\tnumber = {2},\n\turldate = {2021-07-27},\n\tjournal = {WIREs Developmental Biology},\n\tauthor = {Sasakura, Yasunori and Hozumi, Akiko},\n\tmonth = mar,\n\tyear = {2018},\n}\n
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\n \n\n \n \n Satoh, T., Iitsuka, T., Shiraishi, A., Hozumi, A., Satake, H., & Sasakura, Y.\n\n\n \n \n \n \n \n piRNA-like small RNAs are responsible for the maternal-specific knockdown in the ascidian Ciona intestinalis Type A.\n \n \n \n \n\n\n \n\n\n\n Scientific Reports, 8(1): 5869. December 2018.\n \n\n\n\n
\n\n\n\n \n \n \"piRNA-likePaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{satoh_pirna-like_2018,\n\ttitle = {{piRNA}-like small {RNAs} are responsible for the maternal-specific knockdown in the ascidian \\textit{{Ciona} intestinalis} {Type} {A}},\n\tvolume = {8},\n\tissn = {2045-2322},\n\turl = {http://www.nature.com/articles/s41598-018-24319-w},\n\tdoi = {10.1038/s41598-018-24319-w},\n\tlanguage = {en},\n\tnumber = {1},\n\turldate = {2021-07-27},\n\tjournal = {Scientific Reports},\n\tauthor = {Satoh, Teruki and Iitsuka, Takako and Shiraishi, Akira and Hozumi, Akiko and Satake, Honoo and Sasakura, Yasunori},\n\tmonth = dec,\n\tyear = {2018},\n\tpages = {5869},\n}\n\n
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\n \n\n \n \n Shojima, T., Hou, F., Takahashi, Y., Matsumura, Y., Okai, M., Nakamura, A., Mizuno, K., Inaba, K., Kojima, M., Miyakawa, T., & Tanokura, M.\n\n\n \n \n \n \n \n Crystal structure of a Ca2+-dependent regulator of flagellar motility reveals the open-closed structural transition.\n \n \n \n \n\n\n \n\n\n\n Scientific Reports, 8(1): 2014. December 2018.\n \n\n\n\n
\n\n\n\n \n \n \"CrystalPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n  \n \n 4 downloads\n \n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{shojima_crystal_2018,\n\ttitle = {Crystal structure of a {Ca2}+-dependent regulator of flagellar motility reveals the open-closed structural transition},\n\tvolume = {8},\n\tissn = {2045-2322},\n\turl = {http://www.nature.com/articles/s41598-018-19898-7},\n\tdoi = {10.1038/s41598-018-19898-7},\n\tlanguage = {en},\n\tnumber = {1},\n\turldate = {2021-07-27},\n\tjournal = {Scientific Reports},\n\tauthor = {Shojima, Tomoki and Hou, Feng and Takahashi, Yusuke and Matsumura, Yoshitaka and Okai, Masahiko and Nakamura, Akira and Mizuno, Katsutoshi and Inaba, Kazuo and Kojima, Masaki and Miyakawa, Takuya and Tanokura, Masaru},\n\tmonth = dec,\n\tyear = {2018},\n\tpages = {2014},\n}\n\n
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\n \n\n \n \n Suzuki, H., & Yaguchi, S.\n\n\n \n \n \n \n \n Transforming growth factor-β signal regulates gut bending in the sea urchin embryo.\n \n \n \n \n\n\n \n\n\n\n Development, Growth & Differentiation, 60(4): 216–225. May 2018.\n \n\n\n\n
\n\n\n\n \n \n \"TransformingPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n  \n \n 12 downloads\n \n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{suzuki_transforming_2018,\n\ttitle = {Transforming growth factor-β signal regulates gut bending in the sea urchin embryo},\n\tvolume = {60},\n\tissn = {00121592},\n\turl = {https://onlinelibrary.wiley.com/doi/10.1111/dgd.12434},\n\tdoi = {10.1111/dgd.12434},\n\tlanguage = {en},\n\tnumber = {4},\n\turldate = {2021-07-27},\n\tjournal = {Development, Growth \\& Differentiation},\n\tauthor = {Suzuki, Haruka and Yaguchi, Shunsuke},\n\tmonth = may,\n\tyear = {2018},\n\tpages = {216--225},\n}\n\n
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\n \n\n \n \n Ugwu, S. I., Shiba, K., Inaba, K., & Morita, M.\n\n\n \n \n \n \n \n A Unique Seminal Plasma Protein, Zona Pellucida 3-Like Protein, has Ca2 -Dependent Sperm Agglutination Activity.\n \n \n \n \n\n\n \n\n\n\n Zoological Science, 35(2): 161. April 2018.\n \n\n\n\n
\n\n\n\n \n \n \"APaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n  \n \n 4 downloads\n \n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{ugwu_unique_2018,\n\ttitle = {A {Unique} {Seminal} {Plasma} {Protein}, {Zona} {Pellucida} 3-{Like} {Protein}, has {Ca2} -{Dependent} {Sperm} {Agglutination} {Activity}},\n\tvolume = {35},\n\tissn = {0289-0003},\n\turl = {https://bioone.org/journals/zoological-science/volume-35/issue-2/zs170150/A-Unique-Seminal-Plasma-Protein-Zona-Pellucida-3-Like-Protein/10.2108/zs170150.full},\n\tdoi = {10.2108/zs170150},\n\tnumber = {2},\n\turldate = {2021-07-27},\n\tjournal = {Zoological Science},\n\tauthor = {Ugwu, Stanley Ifeanyi and Shiba, Kogiku and Inaba, Kazuo and Morita, Masaya},\n\tmonth = apr,\n\tyear = {2018},\n\tpages = {161},\n}\n\n
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\n \n\n \n \n Urbarova, I., Patel, H., Forêt, S., Karlsen, B. O., Jørgensen, T. E., Hall-Spencer, J. M, & Johansen, S. D\n\n\n \n \n \n \n \n Elucidating the Small Regulatory RNA Repertoire of the Sea Anemone Anemonia viridis Based on Whole Genome and Small RNA Sequencing.\n \n \n \n \n\n\n \n\n\n\n Genome Biology and Evolution, 10(2): 410–426. February 2018.\n \n\n\n\n
\n\n\n\n \n \n \"ElucidatingPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{urbarova_elucidating_2018,\n\ttitle = {Elucidating the {Small} {Regulatory} {RNA} {Repertoire} of the {Sea} {Anemone} \\textit{{Anemonia} viridis} {Based} on {Whole} {Genome} and {Small} {RNA} {Sequencing}},\n\tvolume = {10},\n\tissn = {1759-6653},\n\turl = {https://academic.oup.com/gbe/article/10/2/410/4827693},\n\tdoi = {10.1093/gbe/evy003},\n\tlanguage = {en},\n\tnumber = {2},\n\turldate = {2021-07-27},\n\tjournal = {Genome Biology and Evolution},\n\tauthor = {Urbarova, Ilona and Patel, Hardip and Forêt, Sylvain and Karlsen, Bård Ove and Jørgensen, Tor Erik and Hall-Spencer, Jason M and Johansen, Steinar D},\n\tmonth = feb,\n\tyear = {2018},\n\tpages = {410--426},\n}\n\n
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\n \n\n \n \n Yaguchi, J., Yamazaki, A., & Yaguchi, S.\n\n\n \n \n \n \n \n Meis transcription factor maintains the neurogenic ectoderm and regulates the anterior-posterior patterning in embryos of a sea urchin, Hemicentrotus pulcherrimus.\n \n \n \n \n\n\n \n\n\n\n Developmental Biology, 444(1): 1–8. December 2018.\n \n\n\n\n
\n\n\n\n \n \n \"MeisPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{yaguchi_meis_2018,\n\ttitle = {Meis transcription factor maintains the neurogenic ectoderm and regulates the anterior-posterior patterning in embryos of a sea urchin, \\textit{{Hemicentrotus} pulcherrimus}},\n\tvolume = {444},\n\tissn = {00121606},\n\turl = {https://linkinghub.elsevier.com/retrieve/pii/S0012160618304287},\n\tdoi = {10.1016/j.ydbio.2018.09.018},\n\tlanguage = {en},\n\tnumber = {1},\n\turldate = {2021-07-27},\n\tjournal = {Developmental Biology},\n\tauthor = {Yaguchi, Junko and Yamazaki, Atsuko and Yaguchi, Shunsuke},\n\tmonth = dec,\n\tyear = {2018},\n\tpages = {1--8},\n}\n\n
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\n \n\n \n \n Yamada, H., Nakamoto, K., Hayakawa, J., Kawamura, T., Kon, K., Shimabukuro, H., & Fukuoka, K.\n\n\n \n \n \n \n \n Seasonal variations in leaf growth of Cymodocea serrulata in subtropical seagrass meadows.\n \n \n \n \n\n\n \n\n\n\n Fisheries Science, 84(3): 461–468. May 2018.\n \n\n\n\n
\n\n\n\n \n \n \"SeasonalPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{yamada_seasonal_2018,\n\ttitle = {Seasonal variations in leaf growth of \\textit{{Cymodocea} serrulata} in subtropical seagrass meadows},\n\tvolume = {84},\n\tissn = {0919-9268, 1444-2906},\n\turl = {http://link.springer.com/10.1007/s12562-018-1183-8},\n\tdoi = {10.1007/s12562-018-1183-8},\n\tlanguage = {en},\n\tnumber = {3},\n\turldate = {2021-07-27},\n\tjournal = {Fisheries Science},\n\tauthor = {Yamada, Hideaki and Nakamoto, Kenta and Hayakawa, Jun and Kawamura, Tomohiko and Kon, Koetsu and Shimabukuro, Hiromori and Fukuoka, Kouki},\n\tmonth = may,\n\tyear = {2018},\n\tpages = {461--468},\n}\n\n
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\n \n\n \n \n Yoshida, K., Shiba, K., Sakamoto, A., Ikenaga, J., Matsunaga, S., Inaba, K., & Yoshida, M.\n\n\n \n \n \n \n \n Ca2+ efflux via plasma membrane Ca2+-ATPase mediates chemotaxis in ascidian sperm.\n \n \n \n \n\n\n \n\n\n\n Scientific Reports, 8(1): 16622. December 2018.\n \n\n\n\n
\n\n\n\n \n \n \"Ca2+Paper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{yoshida_ca2_2018,\n\ttitle = {Ca2+ efflux via plasma membrane {Ca2}+-{ATPase} mediates chemotaxis in ascidian sperm},\n\tvolume = {8},\n\tissn = {2045-2322},\n\turl = {http://www.nature.com/articles/s41598-018-35013-2},\n\tdoi = {10.1038/s41598-018-35013-2},\n\tlanguage = {en},\n\tnumber = {1},\n\turldate = {2021-07-27},\n\tjournal = {Scientific Reports},\n\tauthor = {Yoshida, Kaoru and Shiba, Kogiku and Sakamoto, Ayako and Ikenaga, Jumpei and Matsunaga, Shigeru and Inaba, Kazuo and Yoshida, Manabu},\n\tmonth = dec,\n\tyear = {2018},\n\tpages = {16622},\n}\n\n
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\n \n\n \n \n Yuan, X., McCoy, S. J., Du, Y., Widdicombe, S., & Hall-Spencer, J. M.\n\n\n \n \n \n \n \n Physiological and Behavioral Plasticity of the Sea Cucumber Holothuria forskali (Echinodermata, Holothuroidea) to Acidified Seawater.\n \n \n \n \n\n\n \n\n\n\n Frontiers in Physiology, 9: 1339. September 2018.\n \n\n\n\n
\n\n\n\n \n \n \"PhysiologicalPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{yuan_physiological_2018,\n\ttitle = {Physiological and {Behavioral} {Plasticity} of the {Sea} {Cucumber} \\textit{{Holothuria} forskali} ({Echinodermata}, {Holothuroidea}) to {Acidified} {Seawater}},\n\tvolume = {9},\n\tissn = {1664-042X},\n\turl = {https://www.frontiersin.org/article/10.3389/fphys.2018.01339/full},\n\tdoi = {10.3389/fphys.2018.01339},\n\turldate = {2021-07-27},\n\tjournal = {Frontiers in Physiology},\n\tauthor = {Yuan, Xiutang and McCoy, Sophie J. and Du, Yongfen and Widdicombe, Stephen and Hall-Spencer, Jason M.},\n\tmonth = sep,\n\tyear = {2018},\n\tpages = {1339},\n}\n\n
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\n \n\n \n \n Zhang, Y., Wang, T., Li, H., Bao, N., Hall-Spencer, J. M., & Gao, K.\n\n\n \n \n \n \n \n Rising levels of temperature and CO$_{\\textrm{2}}$ antagonistically affect phytoplankton primary productivity in the South China Sea.\n \n \n \n \n\n\n \n\n\n\n Marine Environmental Research, 141: 159–166. October 2018.\n \n\n\n\n
\n\n\n\n \n \n \"RisingPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{zhang_rising_2018,\n\ttitle = {Rising levels of temperature and {CO}$_{\\textrm{2}}$ antagonistically affect phytoplankton primary productivity in the {South} {China} {Sea}},\n\tvolume = {141},\n\tissn = {01411136},\n\turl = {https://linkinghub.elsevier.com/retrieve/pii/S0141113618304896},\n\tdoi = {10.1016/j.marenvres.2018.08.011},\n\tlanguage = {en},\n\turldate = {2021-07-27},\n\tjournal = {Marine Environmental Research},\n\tauthor = {Zhang, Yong and Wang, Tifeng and Li, He and Bao, Nanou and Hall-Spencer, Jason M. and Gao, Kunshan},\n\tmonth = oct,\n\tyear = {2018},\n\tpages = {159--166},\n}\n\n
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\n \n\n \n \n de Castro, M. C. T., Vance, T., Yunnie, A. L. E., Fileman, T. W., & Hall-Spencer, J. M.\n\n\n \n \n \n \n \n Low salinity as a biosecurity tool for minimizing biofouling on ship sea chests.\n \n \n \n \n\n\n \n\n\n\n Ocean Science, 14(4): 661–667. July 2018.\n \n\n\n\n
\n\n\n\n \n \n \"LowPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n  \n \n abstract \n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{de_castro_low_2018,\n\ttitle = {Low salinity as a biosecurity tool for minimizing biofouling on ship sea chests},\n\tvolume = {14},\n\tissn = {1812-0792},\n\turl = {https://os.copernicus.org/articles/14/661/2018/},\n\tdoi = {10.5194/os-14-661-2018},\n\tabstract = {Abstract. Biofouling is a major vector in the transfer of non-native species around the\nworld. Species can be transported on virtually all submerged areas of ships\n(e.g. hulls, sea chests, propellers) and so antifouling systems are used to\nreduce fouling. However, with increased regulation of biocides used in\nantifoulants (e.g. the International Maritime Organization tributyltin ban\nin 2008), there is a need to find efficient and sustainable alternatives.\nHere, we tested the hypothesis that short doses of low salinity water could\nbe used to kill fouling species in sea chests. Settlement panels were\nsuspended at 1.5 m depth in a Plymouth marina for 24 months by which time\nthey had developed mature biofouling assemblages. We exposed these panels to\nthree different salinities (7, 20 and 33) for 2 hours using a model sea\nchest placed in the marina and flushed with freshwater. Fouling organism\ndiversity and abundance were assessed before panels were treated, immediately\nafter treatment, and then 1 week and 1 month later. Some native ascidian\nDendrodoa grossularia survived, but all other macrobenthos were\nkilled by the salinity 7 treatment after 1 week. The salinity 20 treatment was not\neffective at killing the majority of fouling organisms. On the basis of these\nresults, we propose that sea chests be flushed with freshwater for at least\n2 hours before ships leave port. This would not cause unnecessary delays or\ncosts and could be a major step forward in improving biosecurity.},\n\tlanguage = {en},\n\tnumber = {4},\n\turldate = {2021-07-27},\n\tjournal = {Ocean Science},\n\tauthor = {de Castro, Maria Cecilia T. and Vance, Thomas and Yunnie, Anna L. E. and Fileman, Timothy W. and Hall-Spencer, Jason M.},\n\tmonth = jul,\n\tyear = {2018},\n\tpages = {661--667},\n}\n\n
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\n Abstract. Biofouling is a major vector in the transfer of non-native species around the world. Species can be transported on virtually all submerged areas of ships (e.g. hulls, sea chests, propellers) and so antifouling systems are used to reduce fouling. However, with increased regulation of biocides used in antifoulants (e.g. the International Maritime Organization tributyltin ban in 2008), there is a need to find efficient and sustainable alternatives. Here, we tested the hypothesis that short doses of low salinity water could be used to kill fouling species in sea chests. Settlement panels were suspended at 1.5 m depth in a Plymouth marina for 24 months by which time they had developed mature biofouling assemblages. We exposed these panels to three different salinities (7, 20 and 33) for 2 hours using a model sea chest placed in the marina and flushed with freshwater. Fouling organism diversity and abundance were assessed before panels were treated, immediately after treatment, and then 1 week and 1 month later. Some native ascidian Dendrodoa grossularia survived, but all other macrobenthos were killed by the salinity 7 treatment after 1 week. The salinity 20 treatment was not effective at killing the majority of fouling organisms. On the basis of these results, we propose that sea chests be flushed with freshwater for at least 2 hours before ships leave port. This would not cause unnecessary delays or costs and could be a major step forward in improving biosecurity.\n
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