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\n  \n 2025\n \n \n (1)\n \n \n
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\n \n\n \n \n \n \n \n \n Seasonal and spatial dynamics of the microbiome of the polychaete Lanice conchilega in the Wadden Sea.\n \n \n \n \n\n\n \n Guedán, M. L.; Smykala, M.; Käfer, S.; Mueller, J. S.; Lohmus, K.; Pieck, D.; Engelen, B.; and Gerlach, G.\n\n\n \n\n\n\n Scientific Reports, 15(1): 37731. October 2025.\n \n\n\n\n
\n\n\n\n \n \n \"SeasonalPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n  \n \n abstract \n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{guedan_seasonal_2025,\n\ttitle = {Seasonal and spatial dynamics of the microbiome of the polychaete {Lanice} conchilega in the {Wadden} {Sea}},\n\tvolume = {15},\n\tissn = {2045-2322},\n\turl = {https://www.nature.com/articles/s41598-025-25737-3},\n\tdoi = {10.1038/s41598-025-25737-3},\n\tabstract = {Abstract \n             \n              Rapidly changing abiotic conditions, particularly temperature variations, pose adaptation challenges to many animal communities across the globe. \n              Lanice conchilega \n              , a key polychaete in the ecosystem of the German Wadden Sea, faces an increasing threat hampered by its limited mobility. The microbiome can alleviate stress, alter local environmental conditions, and provide new metabolic capabilities, contributing to host adaptation. To understand the potential roles of the microbiome of \n              L. conchilega \n              , we analysed a broad sample set via 16 S rRNA gene amplicon sequencing. We compared the bacterial composition of the microbiome of \n              L. conchilega \n              with that of the surrounding sediment, and the effect of seasonality, zonation, tidal, and diurnal cycles. Our findings reveal a set of ASVs exclusive to the microbiome of \n              L. conchilega \n              . Community composition was mostly shaped by seasonality, slightly influenced by zonation, day/night cycles, and tides. Notably, \n              Endozoicomonas \n              ASVs were found only in the \n              L. conchilega \n              microbiome and were particularly abundant during summer. These bacteria, known for their symbiotic relationships, broad metabolic capabilities, and linked to heat resistance in corals, are predicted to contribute unique metabolic functions in \n              L. conchilega \n              . This work provides novel insights into the host-microbiome relationship of \n              L. conchileg \n              a and highlights the potential role of symbionts in the environmental adaptation of these and similar animals.},\n\tlanguage = {en},\n\tnumber = {1},\n\turldate = {2026-02-18},\n\tjournal = {Scientific Reports},\n\tauthor = {Guedán, Manuel Lanza and Smykala, Mike and Käfer, Simon and Mueller, Jasmin S. and Lohmus, Kertu and Pieck, Daniela and Engelen, Bert and Gerlach, Gabriele},\n\tmonth = oct,\n\tyear = {2025},\n\tpages = {37731},\n}\n\n
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\n Abstract Rapidly changing abiotic conditions, particularly temperature variations, pose adaptation challenges to many animal communities across the globe. Lanice conchilega , a key polychaete in the ecosystem of the German Wadden Sea, faces an increasing threat hampered by its limited mobility. The microbiome can alleviate stress, alter local environmental conditions, and provide new metabolic capabilities, contributing to host adaptation. To understand the potential roles of the microbiome of L. conchilega , we analysed a broad sample set via 16 S rRNA gene amplicon sequencing. We compared the bacterial composition of the microbiome of L. conchilega with that of the surrounding sediment, and the effect of seasonality, zonation, tidal, and diurnal cycles. Our findings reveal a set of ASVs exclusive to the microbiome of L. conchilega . Community composition was mostly shaped by seasonality, slightly influenced by zonation, day/night cycles, and tides. Notably, Endozoicomonas ASVs were found only in the L. conchilega microbiome and were particularly abundant during summer. These bacteria, known for their symbiotic relationships, broad metabolic capabilities, and linked to heat resistance in corals, are predicted to contribute unique metabolic functions in L. conchilega . This work provides novel insights into the host-microbiome relationship of L. conchileg a and highlights the potential role of symbionts in the environmental adaptation of these and similar animals.\n
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\n  \n 2024\n \n \n (1)\n \n \n
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\n \n\n \n \n \n \n \n \n Drone-based monitoring of intertidal blue mussel beds in the Wadden Sea – comparison of a threshold and two machine learning approaches.\n \n \n \n \n\n\n \n Schnurawa, M.; Mueller, J. S.; Schade, H.; and Nehls, G.\n\n\n \n\n\n\n Frontiers in Marine Science, 11: 1381036. April 2024.\n \n\n\n\n
\n\n\n\n \n \n \"Drone-basedPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n  \n \n abstract \n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{schnurawa_drone-based_2024,\n\ttitle = {Drone-based monitoring of intertidal blue mussel beds in the {Wadden} {Sea} – comparison of a threshold and two machine learning approaches},\n\tvolume = {11},\n\tissn = {2296-7745},\n\turl = {https://www.frontiersin.org/articles/10.3389/fmars.2024.1381036/full},\n\tdoi = {10.3389/fmars.2024.1381036},\n\tabstract = {In the Wadden Sea, intertidal mussel beds of the blue mussel ( \n              Mytilus edulis \n              ) and the Pacific oyster ( \n              Magallana gigas \n              ) form distinct epibenthic communities and local hotspots of high biomass and biodiversity. To detect and evaluate natural and anthropogenic processes, a ground-based monitoring program started over 25 years ago in the German Wadden Sea. In this study, we describe the potential of drones and machine learning approaches for a remote sensing-based integration into an existing monitoring program of intertidal mussel beds. A fixed wing drone was used to cover an area of up to 39ha in a single flight, with an overall time saving potential of 50\\%. Applying machine learning approaches, a detailed extraction of the intertidal blue mussel bed coverage with an overall accuracy (OA) up to 95.6\\% was reached, applying a Support Vector Machine (SVM). The application of a multispectral sensor improved the classification performance. Compared to ground-based monitoring, the drone-based method provided significantly more information on the area extension, coverage, and associated algae of the mussel beds. The results show that drones can provide a non-invasive way to survey large and difficult to access areas providing detailed maps of mussel beds and their internal structures.},\n\turldate = {2025-03-13},\n\tjournal = {Frontiers in Marine Science},\n\tauthor = {Schnurawa, Marc and Mueller, Jasmin S. and Schade, Hanna and Nehls, Georg},\n\tmonth = apr,\n\tyear = {2024},\n\tpages = {1381036},\n}\n
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\n In the Wadden Sea, intertidal mussel beds of the blue mussel ( Mytilus edulis ) and the Pacific oyster ( Magallana gigas ) form distinct epibenthic communities and local hotspots of high biomass and biodiversity. To detect and evaluate natural and anthropogenic processes, a ground-based monitoring program started over 25 years ago in the German Wadden Sea. In this study, we describe the potential of drones and machine learning approaches for a remote sensing-based integration into an existing monitoring program of intertidal mussel beds. A fixed wing drone was used to cover an area of up to 39ha in a single flight, with an overall time saving potential of 50%. Applying machine learning approaches, a detailed extraction of the intertidal blue mussel bed coverage with an overall accuracy (OA) up to 95.6% was reached, applying a Support Vector Machine (SVM). The application of a multispectral sensor improved the classification performance. Compared to ground-based monitoring, the drone-based method provided significantly more information on the area extension, coverage, and associated algae of the mussel beds. The results show that drones can provide a non-invasive way to survey large and difficult to access areas providing detailed maps of mussel beds and their internal structures.\n
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\n  \n 2023\n \n \n (1)\n \n \n
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\n \n\n \n \n \n \n \n \n Mass mortality event of the giant barrel sponge Xestospongia sp.: population dynamics and size distribution in Koh Phangan, Gulf of Thailand.\n \n \n \n \n\n\n \n Mueller, J. S.; Grammel, P.; Bill, N.; Rohde, S.; and Schupp, P. J.\n\n\n \n\n\n\n PeerJ, 11: e16561. December 2023.\n \n\n\n\n
\n\n\n\n \n \n \"MassPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n  \n \n abstract \n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{mueller_mass_2023,\n\ttitle = {Mass mortality event of the giant barrel sponge \\textit{{Xestospongia}} sp.: population dynamics and size distribution in {Koh} {Phangan}, {Gulf} of {Thailand}},\n\tvolume = {11},\n\tissn = {2167-8359},\n\tshorttitle = {Mass mortality event of the giant barrel sponge \\textit{{Xestospongia}} sp.},\n\turl = {https://peerj.com/articles/16561},\n\tdoi = {10.7717/peerj.16561},\n\tabstract = {Marine sponges are prominent organisms of the benthic coral reef fauna, providing important ecosystem services. While there have been increasing reports that sponges are becoming one of the dominant benthic organisms in some locations and ecoregions ( \n              e.g \n              . Caribbean), they can be impacted by changing environmental conditions. This study presents the first documentation of a mass mortality event of the barrel sponge \n              Xestospongia \n              sp. in the lower Gulf of Thailand and its consequences on population dynamics and size distribution. Two anthropogenic impacted reefs (Haad Khom and Mae Haad) of the island Koh Phangan and two anthropogenic non-impacted reefs of the islands Koh Yippon and Hin Yippon within the Mu Ko Ang Thong Marine National Park were surveyed in the years 2015 and 2016. The results showed a strong shift in population densities at Koh Phangan. Fatal “bleaching” ending up in mass mortality was observed for these reefs in 2015. \n              Xestospongia \n              sp. abundance decreased from 2015 to 2016 by 80.6\\% at Haad Khom and by 98.4\\% at Mae Haad. Sponges of all sizes were affected, and mortality occurred regardless of the survey depth (4 and 6 m). However, \n              Xestospongia \n              population densities in the Marine Park were at a constant level during the surveys. The abundances in 2015 were 65\\% higher at the Marine Park than at Koh Phangan and 92\\% higher in 2016. The most likely causes of the mass mortality event was a local harmful algal bloom event, pathogens, undetected local higher water temperatures, or a combination of these factors, whereas sea surface temperature analyses showed no marine heatwave during the observed mass mortality event in 2015. Considering the ecological importance of sponges such as \n              Xestospongia \n              sp., long-term monitoring of reefs and their environmental parameters should be implemented to prevent such mass die-offs.},\n\tlanguage = {en},\n\turldate = {2024-01-11},\n\tjournal = {PeerJ},\n\tauthor = {Mueller, Jasmin S. and Grammel, Paul-Jannis and Bill, Nicolas and Rohde, Sven and Schupp, Peter J.},\n\tmonth = dec,\n\tyear = {2023},\n\tpages = {e16561},\n}\n\n
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\n Marine sponges are prominent organisms of the benthic coral reef fauna, providing important ecosystem services. While there have been increasing reports that sponges are becoming one of the dominant benthic organisms in some locations and ecoregions ( e.g . Caribbean), they can be impacted by changing environmental conditions. This study presents the first documentation of a mass mortality event of the barrel sponge Xestospongia sp. in the lower Gulf of Thailand and its consequences on population dynamics and size distribution. Two anthropogenic impacted reefs (Haad Khom and Mae Haad) of the island Koh Phangan and two anthropogenic non-impacted reefs of the islands Koh Yippon and Hin Yippon within the Mu Ko Ang Thong Marine National Park were surveyed in the years 2015 and 2016. The results showed a strong shift in population densities at Koh Phangan. Fatal “bleaching” ending up in mass mortality was observed for these reefs in 2015. Xestospongia sp. abundance decreased from 2015 to 2016 by 80.6% at Haad Khom and by 98.4% at Mae Haad. Sponges of all sizes were affected, and mortality occurred regardless of the survey depth (4 and 6 m). However, Xestospongia population densities in the Marine Park were at a constant level during the surveys. The abundances in 2015 were 65% higher at the Marine Park than at Koh Phangan and 92% higher in 2016. The most likely causes of the mass mortality event was a local harmful algal bloom event, pathogens, undetected local higher water temperatures, or a combination of these factors, whereas sea surface temperature analyses showed no marine heatwave during the observed mass mortality event in 2015. Considering the ecological importance of sponges such as Xestospongia sp., long-term monitoring of reefs and their environmental parameters should be implemented to prevent such mass die-offs.\n
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\n  \n 2022\n \n \n (1)\n \n \n
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\n \n\n \n \n \n \n \n \n A comprehensive approach to assess marine macro litter pollution and its impacts on corals in the Bangka Strait, North Sulawesi, Indonesia.\n \n \n \n \n\n\n \n Mueller, J. S.; Bill, N.; Reinach, M. S.; Lasut, M. T.; Freund, H.; and Schupp, P. J.\n\n\n \n\n\n\n Marine Pollution Bulletin, 175: 113369. February 2022.\n \n\n\n\n
\n\n\n\n \n \n \"APaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{mueller_comprehensive_2022,\n\ttitle = {A comprehensive approach to assess marine macro litter pollution and its impacts on corals in the {Bangka} {Strait}, {North} {Sulawesi}, {Indonesia}},\n\tvolume = {175},\n\tissn = {0025326X},\n\turl = {https://linkinghub.elsevier.com/retrieve/pii/S0025326X22000510},\n\tdoi = {10.1016/j.marpolbul.2022.113369},\n\tlanguage = {en},\n\turldate = {2022-11-08},\n\tjournal = {Marine Pollution Bulletin},\n\tauthor = {Mueller, Jasmin S. and Bill, Nicolas and Reinach, Marco S. and Lasut, Markus T. and Freund, Holger and Schupp, Peter J.},\n\tmonth = feb,\n\tyear = {2022},\n\tpages = {113369},\n}\n\n
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\n  \n 2020\n \n \n (1)\n \n \n
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\n \n\n \n \n \n \n \n \n Shading by marine litter impairs the health of the two Indo-Pacific scleractinian corals Porites rus and Pavona cactus.\n \n \n \n \n\n\n \n Mueller, J. S.; and Schupp, P. J.\n\n\n \n\n\n\n Marine Pollution Bulletin, 158: 111429. September 2020.\n \n\n\n\n
\n\n\n\n \n \n \"ShadingPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{mueller_shading_2020,\n\ttitle = {Shading by marine litter impairs the health of the two {Indo}-{Pacific} scleractinian corals {Porites} rus and {Pavona} cactus},\n\tvolume = {158},\n\tissn = {0025326X},\n\turl = {https://linkinghub.elsevier.com/retrieve/pii/S0025326X20305476},\n\tdoi = {10.1016/j.marpolbul.2020.111429},\n\tlanguage = {en},\n\turldate = {2022-11-09},\n\tjournal = {Marine Pollution Bulletin},\n\tauthor = {Mueller, Jasmin S. and Schupp, Peter J.},\n\tmonth = sep,\n\tyear = {2020},\n\tpages = {111429},\n}\n\n
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