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\n  \n 2026\n \n \n (1)\n \n \n
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\n \n\n \n \n \n \n \n Widespread ecological responses and cascading effects of the 2021 western North American heatwave.\n \n \n \n\n\n \n Baum, J. K; Slein, M. A; Garen, J. C; Sang, Z.; Emry, S.; Goodwin, K. J.; Collins, C. G; Lewthwaite, J.; Tseng, M.; Michaletz, S. T; and others\n\n\n \n\n\n\n Nature Ecology & Evolution,1–16. 2026.\n \n\n\n\n
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@article{baum2026widespread,\n  title={Widespread ecological responses and cascading effects of the 2021 western North American heatwave},\n  author={Baum, Julia K and Slein, Margaret A and Garen, Josef C and Sang, Zihaohan and Emry, Sandra and Goodwin, Katie JA and Collins, Courtney G and Lewthwaite, Jayme and Tseng, Michelle and Michaletz, Sean T and others},\n  journal={Nature Ecology \\& Evolution},\n  pages={1--16},\n  year={2026},\n  publisher={Nature Publishing Group UK London}\n}\n\n
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\n  \n 2025\n \n \n (8)\n \n \n
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\n \n\n \n \n \n \n \n Mating-induced patterns of spermathecal fluid protein expression in two eusocial insect species, Lasius niger and Apis mellifera.\n \n \n \n\n\n \n McAfee, A.; Degueldre, F.; Hoover, S. E; Aron, S.; and Foster, L. J\n\n\n \n\n\n\n Scientific Reports, 15(1): 38917. 2025.\n \n\n\n\n
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@article{mcafee2025mating,\n  title={Mating-induced patterns of spermathecal fluid protein expression in two eusocial insect species, Lasius niger and Apis mellifera},\n  author={McAfee, Alison and Degueldre, F{\\'e}licien and Hoover, Shelley E and Aron, Serge and Foster, Leonard J},\n  journal={Scientific Reports},\n  volume={15},\n  number={1},\n  pages={38917},\n  year={2025},\n  publisher={Nature Publishing Group UK London}\n}\n\n
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\n \n\n \n \n \n \n \n Elevated virus infection of honey bee queens reduces methyl oleate production and destabilizes colony-level social structure.\n \n \n \n\n\n \n McAfee, A.; Chapman, A.; Alcazar Magaña, A.; Marshall, K. E; Hoover, S. E; Tarpy, D. R; and Foster, L. J\n\n\n \n\n\n\n Proceedings of the National Academy of Sciences, 122(42): e2518975122. 2025.\n \n\n\n\n
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@article{mcafee2025elevated,\n  title={Elevated virus infection of honey bee queens reduces methyl oleate production and destabilizes colony-level social structure},\n  author={McAfee, Alison and Chapman, Abigail and Alcazar Maga{\\~n}a, Armando and Marshall, Katie E and Hoover, Shelley E and Tarpy, David R and Foster, Leonard J},\n  journal={Proceedings of the National Academy of Sciences},\n  volume={122},\n  number={42},\n  pages={e2518975122},\n  year={2025},\n  publisher={National Academy of Sciences}\n}\n\n
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\n \n\n \n \n \n \n \n Standard methods and good practices in Apis honey bee omics research.\n \n \n \n\n\n \n Techer, M. A; Chakrabarti, P.; Caesar, L.; Eynard, S. E; Farrell, M C.; Foster, L. J; Gorrochategui-Ortega, J.; Henriques, D.; Li-Byarlay, H.; Morré, J. T; and others\n\n\n \n\n\n\n Journal of Apicultural Research, 64(2): 307–402. 2025.\n \n\n\n\n
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@article{techer2025standard,\n  title={Standard methods and good practices in Apis honey bee omics research},\n  author={Techer, Maeva A and Chakrabarti, Priyadarshini and Caesar, L{\\'\\i}lian and Eynard, Sonia E and Farrell, M Catherine and Foster, Leonard J and Gorrochategui-Ortega, June and Henriques, Dora and Li-Byarlay, Hongmei and Morr{\\'e}, Jeffrey T and others},\n  journal={Journal of Apicultural Research},\n  volume={64},\n  number={2},\n  pages={307--402},\n  year={2025},\n  publisher={Taylor \\& Francis}\n}\n\n
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\n \n\n \n \n \n \n \n Honey bee egg composition changes seasonally and after acute maternal virus infection.\n \n \n \n\n\n \n Chapman, A.; McAfee, A.; Wrightson, K. L.; Magaña, A. A.; Tarpy, D. R; Fine, J. D; Rempel, Z.; Peters, K.; Currie, R. W; Hoover, S. E.; and others\n\n\n \n\n\n\n Scientific Reports, 15(1): 10418. 2025.\n \n\n\n\n
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@article{chapman2025honey,\n  title={Honey bee egg composition changes seasonally and after acute maternal virus infection},\n  author={Chapman, Abigail and McAfee, Alison and Wrightson, Kenzie LC and Maga{\\~n}a, Armando Alcazar and Tarpy, David R and Fine, Julia D and Rempel, Zoe and Peters, Kira and Currie, Rob W and Hoover, Shelley ER and others},\n  journal={Scientific Reports},\n  volume={15},\n  number={1},\n  pages={10418},\n  year={2025},\n  publisher={Nature Publishing Group UK London}\n}\n\n
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\n \n\n \n \n \n \n \n Factors affecting heat resilience of drone honey bees (Apis mellifera) and their sperm.\n \n \n \n\n\n \n McAfee, A.; Metz, B. N; Connor, P.; Du, K.; Allen, C. W; Frausto, L. A; Swenson, M. P; Phillips, K. S; Julien, M.; Rempel, Z.; and others\n\n\n \n\n\n\n PloS one, 20(2): e0317672. 2025.\n \n\n\n\n
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@article{mcafee2025factors,\n  title={Factors affecting heat resilience of drone honey bees (Apis mellifera) and their sperm},\n  author={McAfee, Alison and Metz, Bradley N and Connor, Patrick and Du, Keana and Allen, Christopher W and Frausto, Luis A and Swenson, Mark P and Phillips, Kylah S and Julien, Madison and Rempel, Zoe and others},\n  journal={PloS one},\n  volume={20},\n  number={2},\n  pages={e0317672},\n  year={2025},\n  publisher={Public Library of Science San Francisco, CA USA}\n}\n\n
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\n \n\n \n \n \n \n \n \n Western red cedar (Thuja plicata) beehives have no impact on honey bee (Apis mellifera) overwintering colony survival or detoxification enzyme expression.\n \n \n \n \n\n\n \n McAfee, A. A. T.; and David R. AND Foster, L. J.\n\n\n \n\n\n\n PLOS ONE, 20(4): 1-12. 04 2025.\n \n\n\n\n
\n\n\n\n \n \n \"WesternPaper\n  \n \n\n \n \n doi\n  \n \n\n \n link\n  \n \n\n bibtex\n \n\n \n  \n \n abstract \n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{10.1371/journal.pone.0318764,\n    doi = {10.1371/journal.pone.0318764},\n    author = {McAfee, Alison AND Tarpy, David R. AND Foster, Leonard J.},\n    journal = {PLOS ONE},\n    publisher = {Public Library of Science},\n    title = {Western red cedar (Thuja plicata) beehives have no impact on honey bee (Apis mellifera) overwintering colony survival or detoxification enzyme expression},\n    year = {2025},\n    month = {04},\n    volume = {20},\n    url = {https://doi.org/10.1371/journal.pone.0318764},\n    pages = {1-12},\n    abstract = {In North America, wooden honey bee hives are most often constructed from pine, but some companies also produce and sell boxes made of western red cedar (Thuja plicata) as a result of its local availability and desirable properties. However, there is debate within the beekeeping community about whether cedar is a safe hive material for bees, since resins within the wood are known to be insecticidal or insect deterrents. There is very little empirical evidence to support or refute these arguments. Here, we recorded health metrics of honey bee nucleus colonies hived in western red cedar and pine boxes (n = 10 each) to determine if the type of wood affects colony outcomes. Colonies were produced and introduced into these boxes in late July, with monitoring continued until the following spring. We found no significant differences in adult bee populations, brood areas, or Varroa mite prevalence among colonies hived in cedar versus pine boxes at either the end of summer (September 1st) or spring (April 1st) assessments. Overwintering survival was identical in the two groups at 90%. Hemolymph detoxification enzyme expression differed strongly between callow (day-old) workers and foragers but did not differ with hive material. Overall, we did not find evidence that hiving honey bee colonies in boxes constructed of western red cedar had any negative or positive effect on bee physiology or colony outcomes.},\n    number = {4},\n\n}\n\n
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\n In North America, wooden honey bee hives are most often constructed from pine, but some companies also produce and sell boxes made of western red cedar (Thuja plicata) as a result of its local availability and desirable properties. However, there is debate within the beekeeping community about whether cedar is a safe hive material for bees, since resins within the wood are known to be insecticidal or insect deterrents. There is very little empirical evidence to support or refute these arguments. Here, we recorded health metrics of honey bee nucleus colonies hived in western red cedar and pine boxes (n = 10 each) to determine if the type of wood affects colony outcomes. Colonies were produced and introduced into these boxes in late July, with monitoring continued until the following spring. We found no significant differences in adult bee populations, brood areas, or Varroa mite prevalence among colonies hived in cedar versus pine boxes at either the end of summer (September 1st) or spring (April 1st) assessments. Overwintering survival was identical in the two groups at 90%. Hemolymph detoxification enzyme expression differed strongly between callow (day-old) workers and foragers but did not differ with hive material. Overall, we did not find evidence that hiving honey bee colonies in boxes constructed of western red cedar had any negative or positive effect on bee physiology or colony outcomes.\n
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\n \n\n \n \n \n \n \n Regional patterns and climatic predictors of viruses in honey bee (Apis mellifera) colonies over time.\n \n \n \n\n\n \n McAfee, A.; Alavi-Shoushtari, N.; Labuschagne, R.; Tran, L.; Common, J.; Higo, H.; Pernal, S. F; Giovenazzo, P.; Hoover, S. E; Guzman-Novoa, E.; and others\n\n\n \n\n\n\n Scientific Reports, 15(1): 286. 2025.\n \n\n\n\n
\n\n\n\n \n\n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{mcafee2025regional,\n  title={Regional patterns and climatic predictors of viruses in honey bee (Apis mellifera) colonies over time},\n  author={McAfee, Alison and Alavi-Shoushtari, Niloofar and Labuschagne, Renata and Tran, Lan and Common, Julia and Higo, Heather and Pernal, Stephen F and Giovenazzo, Pierre and Hoover, Shelley E and Guzman-Novoa, Ernesto and others},\n  journal={Scientific Reports},\n  volume={15},\n  number={1},\n  pages={286},\n  year={2025},\n  publisher={Nature Publishing Group UK London}\n}\n\n
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\n \n\n \n \n \n \n \n The effect of major abiotic stressors on honey bee (Apis mellifera L.) queens and potential impact on their progeny.\n \n \n \n\n\n \n Amiri, E.; Abou-Shaara, H.; and McAfee, A.\n\n\n \n\n\n\n Apidologie, 56(1): 2. 2025.\n \n\n\n\n
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@article{amiri2025effect,\n  title={The effect of major abiotic stressors on honey bee (Apis mellifera L.) queens and potential impact on their progeny},\n  author={Amiri, Esmaeil and Abou-Shaara, Hossam and McAfee, Alison},\n  journal={Apidologie},\n  volume={56},\n  number={1},\n  pages={2},\n  year={2025},\n  publisher={Springer}\n}\n\n
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\n  \n 2024\n \n \n (9)\n \n \n
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\n \n\n \n \n \n \n \n Climatic predictors of prominent honey bee (Apis mellifera) disease agents: Varroa destructor, Melissococcus plutonius, and Vairimorpha spp.\n \n \n \n\n\n \n McAfee, A.; Alavi-Shoushtari, N.; Tran, L.; Labuschagne, R.; Cunningham, M.; Tsvetkov, N.; Common, J.; Higo, H.; Pernal, S. F; Giovenazzo, P.; and others\n\n\n \n\n\n\n PLOS Climate, 3(8): e0000485. 2024.\n \n\n\n\n
\n\n\n\n \n\n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{mcafee2024climatic,\n  title={Climatic predictors of prominent honey bee (Apis mellifera) disease agents: Varroa destructor, Melissococcus plutonius, and Vairimorpha spp.},\n  author={McAfee, Alison and Alavi-Shoushtari, Niloofar and Tran, Lan and Labuschagne, Renata and Cunningham, Morgan and Tsvetkov, Nadejda and Common, Julia and Higo, Heather and Pernal, Stephen F and Giovenazzo, Pierre and others},\n  journal={PLOS Climate},\n  volume={3},\n  number={8},\n  pages={e0000485},\n  year={2024},\n  publisher={Public Library of Science San Francisco, CA USA}\n}\n\n
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\n \n\n \n \n \n \n \n Differences in honeybee queen pheromones revealed by LC-MS/MS: Reassessing the honest signal hypothesis.\n \n \n \n\n\n \n McAfee, A.; Magaña, A. A.; Foster, L. J; and Hoover, S. E\n\n\n \n\n\n\n Iscience, 27(10). 2024.\n \n\n\n\n
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@article{mcafee2024differences,\n  title={Differences in honeybee queen pheromones revealed by LC-MS/MS: Reassessing the honest signal hypothesis},\n  author={McAfee, Alison and Maga{\\~n}a, Armando Alcazar and Foster, Leonard J and Hoover, Shelley E},\n  journal={Iscience},\n  volume={27},\n  number={10},\n  year={2024},\n  publisher={Elsevier}\n}\n\n
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\n \n\n \n \n \n \n \n Conserved and unique protein expression patterns across reproductive stage transitions in social hymenopteran queens.\n \n \n \n\n\n \n McAfee, A.; Martinet, B.; Przybyla, K.; Degueldre, F.; Hoover, S. E; Aron, S.; and Foster, L. J\n\n\n \n\n\n\n Molecular Ecology,e17568. 2024.\n \n\n\n\n
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@article{mcafee2024conserved,\n  title={Conserved and unique protein expression patterns across reproductive stage transitions in social hymenopteran queens},\n  author={McAfee, Alison and Martinet, Baptiste and Przybyla, Kimberly and Degueldre, F{\\'e}licien and Hoover, Shelley E and Aron, Serge and Foster, Leonard J},\n  journal={Molecular Ecology},\n  pages={e17568},\n  year={2024},\n  publisher={Wiley Online Library}\n}\n\n
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\n \n\n \n \n \n \n \n Common viral infections inhibit egg laying in honey bee queens and are linked to premature supersedure.\n \n \n \n\n\n \n Chapman, A.; McAfee, A.; Tarpy, D. R; Fine, J.; Rempel, Z.; Peters, K.; Currie, R.; and Foster, L. J\n\n\n \n\n\n\n Scientific Reports, 14(1): 17285. 2024.\n \n\n\n\n
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@article{chapman2024common,\n  title={Common viral infections inhibit egg laying in honey bee queens and are linked to premature supersedure},\n  author={Chapman, Abigail and McAfee, Alison and Tarpy, David R and Fine, Julia and Rempel, Zoe and Peters, Kira and Currie, Rob and Foster, Leonard J},\n  journal={Scientific Reports},\n  volume={14},\n  number={1},\n  pages={17285},\n  year={2024},\n  publisher={Nature Publishing Group UK London}\n}\n\n
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\n \n\n \n \n \n \n \n Mechanisms of pathogen and pesticide resistance in honey bees.\n \n \n \n\n\n \n Foster, L. J; Tsvetkov, N.; and McAfee, A.\n\n\n \n\n\n\n Physiology, 39(4): 000–000. 2024.\n \n\n\n\n
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@article{foster2024mechanisms,\n  title={Mechanisms of pathogen and pesticide resistance in honey bees},\n  author={Foster, Leonard J and Tsvetkov, Nadejda and McAfee, Alison},\n  journal={Physiology},\n  volume={39},\n  number={4},\n  pages={000--000},\n  year={2024},\n  publisher={American Physiological Society Rockville, MD}\n}\n\n
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\n \n\n \n \n \n \n \n Higher prevalence of sacbrood virus in Apis mellifera (Hymenoptera: Apidae) colonies after pollinating highbush blueberries.\n \n \n \n\n\n \n McAfee, A.; French, S. K; Wizenberg, S. B; Newburn, L. R; Tsvetkov, N.; Higo, H.; Common, J.; Pernal, S. F; Giovenazzo, P.; Hoover, S. E; and others\n\n\n \n\n\n\n Journal of Economic Entomology,toae119. 2024.\n \n\n\n\n
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@article{mcafee2024higher,\n  title={Higher prevalence of sacbrood virus in Apis mellifera (Hymenoptera: Apidae) colonies after pollinating highbush blueberries},\n  author={McAfee, Alison and French, Sarah K and Wizenberg, Sydney B and Newburn, Laura R and Tsvetkov, Nadejda and Higo, Heather and Common, Julia and Pernal, Stephen F and Giovenazzo, Pierre and Hoover, Shelley E and others},\n  journal={Journal of Economic Entomology},\n  pages={toae119},\n  year={2024},\n  publisher={Oxford University Press US}\n}\n\n
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\n \n\n \n \n \n \n \n What proteomics has taught us about honey bee (Apis mellifera) health and disease.\n \n \n \n\n\n \n Arad, M.; Ku, K.; Frey, C.; Hare, R.; McAfee, A.; Ghafourifar, G.; and Foster, L. J\n\n\n \n\n\n\n Proteomics,2400075. 2024.\n \n\n\n\n
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@article{arad2024proteomics,\n  title={What proteomics has taught us about honey bee (Apis mellifera) health and disease},\n  author={Arad, Maor and Ku, Kenneth and Frey, Connor and Hare, Rhien and McAfee, Alison and Ghafourifar, Golfam and Foster, Leonard J},\n  journal={Proteomics},\n  pages={2400075},\n  year={2024},\n  publisher={Wiley Online Library}\n}\n\n
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\n \n\n \n \n \n \n \n Metagenomic analysis of the honey bee queen microbiome reveals low bacterial diversity and Caudoviricetes phages.\n \n \n \n\n\n \n Caesar, L.; Rice, D. W; McAfee, A.; Underwood, R.; Ganote, C.; Tarpy, D. R; Foster, L. J; and Newton, I. L.\n\n\n \n\n\n\n Msystems,e01182–23. 2024.\n \n\n\n\n
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@article{caesar2024metagenomic,\n  title={Metagenomic analysis of the honey bee queen microbiome reveals low bacterial diversity and Caudoviricetes phages},\n  author={Caesar, L{\\'\\i}lian and Rice, Danny W and McAfee, Alison and Underwood, Robyn and Ganote, Carrie and Tarpy, David R and Foster, Leonard J and Newton, Irene LG},\n  journal={Msystems},\n  pages={e01182--23},\n  year={2024},\n  publisher={Am Soc Microbiol}\n}\n\n
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\n \n\n \n \n \n \n \n Investigating trade-offs between ovary activation and immune protein expression in bumble bee (Bombus impatiens) workers and queens.\n \n \n \n\n\n \n McAfee, A.; Chapman, A.; Bao, G.; Tarpy, D. R; and Foster, L. J\n\n\n \n\n\n\n Proceedings of the Royal Society B, 291(2015): 20232463. 2024.\n \n\n\n\n
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@article{mcafee2024investigating,\n  title={Investigating trade-offs between ovary activation and immune protein expression in bumble bee (Bombus impatiens) workers and queens},\n  author={McAfee, Alison and Chapman, Abigail and Bao, Grace and Tarpy, David R and Foster, Leonard J},\n  journal={Proceedings of the Royal Society B},\n  volume={291},\n  number={2015},\n  pages={20232463},\n  year={2024},\n  publisher={The Royal Society}\n}\n\n
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\n  \n 2023\n \n \n (1)\n \n \n
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\n \n\n \n \n \n \n \n Indirect exposure to insect growth disruptors affects honey bee (Apis mellifera) reproductive behaviors and ovarian protein expression.\n \n \n \n\n\n \n Fine, J. D; Foster, L. J; and McAfee, A.\n\n\n \n\n\n\n Plos one, 18(10): e0292176. 2023.\n \n\n\n\n
\n\n\n\n \n\n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{fine2023indirect,\n  title={Indirect exposure to insect growth disruptors affects honey bee (Apis mellifera) reproductive behaviors and ovarian protein expression},\n  author={Fine, Julia D and Foster, Leonard J and McAfee, Alison},\n  journal={Plos one},\n  volume={18},\n  number={10},\n  pages={e0292176},\n  year={2023},\n  publisher={Public Library of Science San Francisco, CA USA}\n}\n\n
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\n  \n 2022\n \n \n (4)\n \n \n
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\n \n\n \n \n \n \n \n Fertility costs of cryptic viral infections in a model social insect.\n \n \n \n\n\n \n Chapman, A.; Amiri, E.; Han, B.; McDermott, E.; Rueppell, O.; Tarpy, D. R; Foster, L. J; and McAfee, A.\n\n\n \n\n\n\n Scientific Reports, 12(1): 1–14. 2022.\n \n\n\n\n
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@article{chapman2022fertility,\n  title={Fertility costs of cryptic viral infections in a model social insect},\n  author={Chapman, Abigail and Amiri, Esmaeil and Han, Bin and McDermott, Erin and Rueppell, Olav and Tarpy, David R and Foster, Leonard J and McAfee, Alison},\n  journal={Scientific Reports},\n  volume={12},\n  number={1},\n  pages={1--14},\n  year={2022},\n  publisher={Nature Publishing Group}\n}\n\n
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\n \n\n \n \n \n \n \n Honey bee genome editing.\n \n \n \n\n\n \n McAfee A, L. J; and M., O.\n\n\n \n\n\n\n In Transgenic Insects: Techniques and Applications, 2022. CABI Publishing\n \n\n\n\n
\n\n\n\n \n\n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n  \n \n 1 download\n \n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@InProceedings{ mcafee2022genomeediting,\n              author =       {McAfee A, Li J, and Otte M.},\n              title =        {Honey bee genome editing},\n              booktitle =    {Transgenic Insects: Techniques and Applications},\n              year =         {2022},\n              publisher =    {CABI Publishing},\n              chapter =    {18}\n              }\n\n
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\n \n\n \n \n \n \n \n Drone honey bees are disproportionately sensitive to abiotic stressors despite expressing high levels of stress response proteins.\n \n \n \n\n\n \n McAfee, A.; Metz, B. N; Milone, J. P; Foster, L. J; and Tarpy, D. R\n\n\n \n\n\n\n Communications Biology, 5(1): 1–13. 2022.\n \n\n\n\n
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@article{mcafee2022drone,\n  title={Drone honey bees are disproportionately sensitive to abiotic stressors despite expressing high levels of stress response proteins},\n  author={McAfee, Alison and Metz, Bradley N and Milone, Joseph P and Foster, Leonard J and Tarpy, David R},\n  journal={Communications Biology},\n  volume={5},\n  number={1},\n  pages={1--13},\n  year={2022},\n  publisher={Nature Publishing Group}\n}\n\n
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\n \n\n \n \n \n \n \n Editorial: Insect Fertility in a Changing Environment.\n \n \n \n\n\n \n McAfee A, S. J.; and B, M.\n\n\n \n\n\n\n Frontiers in Ecology and Evolution. 2022.\n \n\n\n\n
\n\n\n\n \n\n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{mcafee2022insectfertility,\n  title={Editorial: Insect Fertility in a Changing Environment},\n  author={McAfee A, Stillman JH, Marshall KE, and Metz B},\n  journal={Frontiers in Ecology and Evolution},\n  year={2022},\n  publisher={Frontiers}\n}\n\n
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\n  \n 2021\n \n \n (3)\n \n \n
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\n \n\n \n \n \n \n \n Trade-offs between sperm viability and immune protein expression in honey bee queens (Apis mellifera).\n \n \n \n\n\n \n McAfee, A.; Chapman, A.; Pettis, J. S; Foster, L. J; and Tarpy, D. R\n\n\n \n\n\n\n Communications biology, 4(1): 1–11. 2021.\n \n\n\n\n
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@article{mcafee2021trade,\n  title={Trade-offs between sperm viability and immune protein expression in honey bee queens (Apis mellifera)},\n  author={McAfee, Alison and Chapman, Abigail and Pettis, Jeffery S and Foster, Leonard J and Tarpy, David R},\n  journal={Communications biology},\n  volume={4},\n  number={1},\n  pages={1--11},\n  year={2021},\n  publisher={Nature Publishing Group}\n}\n\n
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\n \n\n \n \n \n \n \n Queen honey bees exhibit variable resilience to temperature stress.\n \n \n \n\n\n \n McAfee, A.; Tarpy, D. R; and Foster, L. J\n\n\n \n\n\n\n PloS one, 16(8): e0255381. 2021.\n \n\n\n\n
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@article{mcafee2021queen,\n  title={Queen honey bees exhibit variable resilience to temperature stress},\n  author={McAfee, Alison and Tarpy, David R and Foster, Leonard J},\n  journal={PloS one},\n  volume={16},\n  number={8},\n  pages={e0255381},\n  year={2021},\n  publisher={Public Library of Science San Francisco, CA USA}\n}\n\n
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\n \n\n \n \n \n \n \n Honey bee queen health is unaffected by contact exposure to pesticides commonly found in beeswax.\n \n \n \n\n\n \n McAfee, A.; Milone, J. P; McDermott, E.; Metz, B.; Foster, L.; and Tarpy, D. R\n\n\n \n\n\n\n Scientific Reports, 11: 15151. 2021.\n \n\n\n\n
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@article{mcafee2021honey,\n  title={Honey bee queen health is unaffected by contact exposure to pesticides commonly found in beeswax},\n  author={McAfee, Alison and Milone, Joseph P and McDermott, Erin and Metz, Bradley and Foster, Leonard and Tarpy, David R},\n  journal={Scientific Reports},\n  volume={11},\n  pages={15151},\n  year={2021},\n  publisher={Cold Spring Harbor Laboratory}\n}\n
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\n  \n 2020\n \n \n (5)\n \n \n
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\n \n\n \n \n \n \n \n Differences in larval pesticide tolerance and esterase activity across honey bee (Apis mellifera) stocks.\n \n \n \n\n\n \n Milone, J. P; Rinkevich, F. D; McAfee, A.; Foster, L. J; and Tarpy, D. R\n\n\n \n\n\n\n Ecotoxicology and Environmental Safety, 206: 111213. 2020.\n \n\n\n\n
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@article{milone2020differences,\n  title={Differences in larval pesticide tolerance and esterase activity across honey bee (Apis mellifera) stocks},\n  author={Milone, Joseph P and Rinkevich, Frank D and McAfee, Alison and Foster, Leonard J and Tarpy, David R},\n  journal={Ecotoxicology and Environmental Safety},\n  volume={206},\n  pages={111213},\n  year={2020},\n  publisher={Elsevier}\n}\n\n
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\n \n\n \n \n \n \n \n Candidate stress biomarkers for queen failure diagnostics.\n \n \n \n\n\n \n McAfee, A.; Milone, J.; Chapman, A.; Foster, L. J; Pettis, J. S; and Tarpy, D. R\n\n\n \n\n\n\n BMC Genomics, 21(571). 2020.\n \n\n\n\n
\n\n\n\n \n\n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{mcafee2020candidate,\n  title={Candidate stress biomarkers for queen failure diagnostics},\n  author={McAfee, Alison and Milone, Joseph and Chapman, Abigail and Foster, Leonard J and Pettis, Jeffery S and Tarpy, David R},\n  journal={BMC Genomics},\n  volume={21},\n  number={571},\n  year={2020},\n  publisher={Nature Publishing Group}\n}\n\n
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\n \n\n \n \n \n \n \n Honey bee survival mechanisms against the parasite Varroa destructor: a systematic review of phenotypic and genomic research efforts.\n \n \n \n\n\n \n Fanny, M.; Alexis, B.; Alison, M.; Barbara, L.; Cédric, A.; Solene, B.; Bob, D.; and Le Conte, Y.\n\n\n \n\n\n\n International Journal for Parasitology. 2020.\n \n\n\n\n
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@article{fanny2020honey,\n  title={Honey bee survival mechanisms against the parasite Varroa destructor: a systematic review of phenotypic and genomic research efforts},\n  author={Fanny, Mondet and Alexis, Beaurepaire and Alison, McAfee and Barbara, Locke and C{\\'e}dric, Alaux and Solene, Blanchard and Bob, Danka and Le Conte, Yves},\n  journal={International Journal for Parasitology},\n  year={2020},\n  publisher={Elsevier}\n}\n\n
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\n \n\n \n \n \n \n \n Varroa destructor: A Complex Parasite, Crippling Honey Bees Worldwide.\n \n \n \n\n\n \n Traynor, K. S; Mondet, F.; de Miranda, J. R; Techer, M.; Kowallik, V.; Oddie, M. A.; Chantawannakul, P.; and McAfee, A.\n\n\n \n\n\n\n Trends in Parasitology. 2020.\n \n\n\n\n
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@article{traynor2020varroa,\n  title={Varroa destructor: A Complex Parasite, Crippling Honey Bees Worldwide},\n  author={Traynor, Kirsten S and Mondet, Fanny and de Miranda, Joachim R and Techer, Maeva and Kowallik, Vienna and Oddie, Melissa AY and Chantawannakul, Panuwan and McAfee, Alison},\n  journal={Trends in Parasitology},\n  year={2020},\n  publisher={Elsevier}\n}\n\n
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\n \n\n \n \n \n \n \n Vulnerability of honey bee queens to heat-induced loss of fertility.\n \n \n \n\n\n \n McAfee, A.; Chapman, A.; Higo, H.; Underwood, R.; Milone, J.; Foster, L. J; Guarna, M M.; Tarpy, D. R; and Pettis, J. S\n\n\n \n\n\n\n Nature Sustainability, 3(5): 367–376. 2020.\n \n\n\n\n
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@article{mcafee2020vulnerability,\n  title={Vulnerability of honey bee queens to heat-induced loss of fertility},\n  author={McAfee, Alison and Chapman, Abigail and Higo, Heather and Underwood, Robyn and Milone, Joseph and Foster, Leonard J and Guarna, M Marta and Tarpy, David R and Pettis, Jeffery S},\n  journal={Nature Sustainability},\n  volume={3},\n  number={5},\n  pages={367--376},\n  year={2020},\n  publisher={Nature Publishing Group}\n}\n\n
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\n  \n 2019\n \n \n (1)\n \n \n
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\n \n\n \n \n \n \n \n Feminizer and doublesex knock-outs cause honey bees to switch sexes.\n \n \n \n\n\n \n McAfee, A.; Pettis, J. S; Tarpy, D. R; and Foster, L. J\n\n\n \n\n\n\n PLoS biology, 17(5): e3000256. 2019.\n \n\n\n\n
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@article{mcafee2019feminizer,\n  title={Feminizer and doublesex knock-outs cause honey bees to switch sexes},\n  author={McAfee, Alison and Pettis, Jeffery S and Tarpy, David R and Foster, Leonard J},\n  journal={PLoS biology},\n  volume={17},\n  number={5},\n  pages={e3000256},\n  year={2019},\n  publisher={Public Library of Science}\n}\n\n
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\n  \n 2018\n \n \n (2)\n \n \n
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\n \n\n \n \n \n \n \n Proteomic analysis of chemosensory organs in the honey bee parasite Varroa destructor: a comprehensive examination of the potential carriers for semiochemicals.\n \n \n \n\n\n \n Iovinella, I.; McAfee, A.; Mastrobuoni, G.; Kempa, S.; Foster, L. J; Pelosi, P.; and Dani, F. R.\n\n\n \n\n\n\n Journal of proteomics, 181: 131–141. 2018.\n \n\n\n\n
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@article{iovinella2018proteomic,\n  title={Proteomic analysis of chemosensory organs in the honey bee parasite Varroa destructor: a comprehensive examination of the potential carriers for semiochemicals},\n  author={Iovinella, Immacolata and McAfee, Alison and Mastrobuoni, Guido and Kempa, Stefan and Foster, Leonard J and Pelosi, Paolo and Dani, Francesca Romana},\n  journal={Journal of proteomics},\n  volume={181},\n  pages={131--141},\n  year={2018},\n  publisher={Elsevier}\n}\n\n
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\n \n\n \n \n \n \n \n A death pheromone, oleic acid, triggers hygienic behavior in honey bees (Apis mellifera L.).\n \n \n \n\n\n \n McAfee, A.; Chapman, A.; Iovinella, I.; Gallagher-Kurtzke, Y.; Collins, T. F; Higo, H.; Madilao, L. L; Pelosi, P.; and Foster, L. J\n\n\n \n\n\n\n Scientific reports, 8(1): 1–13. 2018.\n \n\n\n\n
\n\n\n\n \n\n \n\n \n link\n  \n \n\n bibtex\n \n\n \n\n \n\n \n \n \n \n \n \n \n\n  \n \n \n\n\n\n
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@article{mcafee2018death,\n  title={A death pheromone, oleic acid, triggers hygienic behavior in honey bees (Apis mellifera L.)},\n  author={McAfee, Alison and Chapman, Abigail and Iovinella, Immacolata and Gallagher-Kurtzke, Ylonna and Collins, Troy F and Higo, Heather and Madilao, Lufiani L and Pelosi, Paolo and Foster, Leonard J},\n  journal={Scientific reports},\n  volume={8},\n  number={1},\n  pages={1--13},\n  year={2018},\n  publisher={Nature Publishing Group}\n}\n\n
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\n  \n 2017\n \n \n (4)\n \n \n
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\n \n\n \n \n \n \n \n Genomics, transcriptomics and proteomics: enabling insights into social evolution and disease challenges for managed and wild bees.\n \n \n \n\n\n \n Trapp, J.; McAfee, A.; and Foster, L. J\n\n\n \n\n\n\n Molecular ecology, 26(3): 718–739. 2017.\n \n\n\n\n
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@article{trapp2017genomics,\n  title={Genomics, transcriptomics and proteomics: enabling insights into social evolution and disease challenges for managed and wild bees},\n  author={Trapp, Judith and McAfee, Alison and Foster, Leonard J},\n  journal={Molecular ecology},\n  volume={26},\n  number={3},\n  pages={718--739},\n  year={2017},\n  publisher={Wiley Online Library}\n}\n\n
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\n \n\n \n \n \n \n \n Odorant cues linked to social immunity induce lateralized antenna stimulation in honey bees (Apis mellifera L.).\n \n \n \n\n\n \n McAfee, A.; Collins, T. F; Madilao, L. L; and Foster, L. J\n\n\n \n\n\n\n Scientific reports, 7: 46171. 2017.\n \n\n\n\n
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@article{mcafee2017odorant,\n  title={Odorant cues linked to social immunity induce lateralized antenna stimulation in honey bees (Apis mellifera L.)},\n  author={McAfee, Alison and Collins, Troy F and Madilao, Lufiani L and Foster, Leonard J},\n  journal={Scientific reports},\n  volume={7},\n  pages={46171},\n  year={2017},\n  publisher={Nature Publishing Group}\n}\n\n
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\n \n\n \n \n \n \n \n Proteogenomics: Recycling public data to Improve genome annotations.\n \n \n \n\n\n \n McAfee, A; and Foster, L.\n\n\n \n\n\n\n In Methods in Enzymology, volume 585, pages 217–243. Elsevier, 2017.\n \n\n\n\n
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@incollection{mcafee2017proteogenomics,\n  title={Proteogenomics: Recycling public data to Improve genome annotations},\n  author={McAfee, A and Foster, LJ},\n  booktitle={Methods in Enzymology},\n  volume={585},\n  pages={217--243},\n  year={2017},\n  publisher={Elsevier}\n}\n\n
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\n \n\n \n \n \n \n \n A Varroa destructor protein atlas reveals molecular underpinnings of developmental transitions and sexual differentiation.\n \n \n \n\n\n \n McAfee, A.; Chan, Q. W.; Evans, J.; and Foster, L. J\n\n\n \n\n\n\n Molecular & Cellular Proteomics, 16(12): 2125–2137. 2017.\n \n\n\n\n
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@article{mcafee2017varroa,\n  title={A Varroa destructor protein atlas reveals molecular underpinnings of developmental transitions and sexual differentiation},\n  author={McAfee, Alison and Chan, Queenie WT and Evans, Jay and Foster, Leonard J},\n  journal={Molecular \\& Cellular Proteomics},\n  volume={16},\n  number={12},\n  pages={2125--2137},\n  year={2017},\n  publisher={ASBMB}\n}\n\n
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\n  \n 2016\n \n \n (1)\n \n \n
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\n \n\n \n \n \n \n \n Toward an upgraded honey bee (Apis mellifera L.) genome annotation using proteogenomics.\n \n \n \n\n\n \n McAfee, A.; Harpur, B. A; Michaud, S.; Beavis, R. C; Kent, C. F; Zayed, A.; and Foster, L. J\n\n\n \n\n\n\n Journal of Proteome Research, 15(2): 411–421. 2016.\n \n\n\n\n
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@article{mcafee2016toward,\n  title={Toward an upgraded honey bee (Apis mellifera L.) genome annotation using proteogenomics},\n  author={McAfee, Alison and Harpur, Brock A and Michaud, Sarah and Beavis, Ronald C and Kent, Clement F and Zayed, Amro and Foster, Leonard J},\n  journal={Journal of Proteome Research},\n  volume={15},\n  number={2},\n  pages={411--421},\n  year={2016},\n  publisher={ACS Publications}\n}\n\n
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\n  \n 2015\n \n \n (1)\n \n \n
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\n \n\n \n \n \n \n \n Controlled, cross-species dataset for exploring biases in genome annotation and modification profiles.\n \n \n \n\n\n \n McAfee, A.; Michaud, S.; and Foster, L. J\n\n\n \n\n\n\n Data in brief, 5: 829–833. 2015.\n \n\n\n\n
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@article{mcafee2015controlled,\n  title={Controlled, cross-species dataset for exploring biases in genome annotation and modification profiles},\n  author={McAfee, Alison and Michaud, Sarah and Foster, Leonard J},\n  journal={Data in brief},\n  volume={5},\n  pages={829--833},\n  year={2015},\n  publisher={Elsevier}\n}\n\n
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\n \n\n \n \n \n \n \n Honey bee genome editing.\n \n \n \n\n\n \n \n\n\n \n\n\n\n . .\n \n\n\n\n
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