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\n\n \n \n \n \n \n A novel statistical method for quantitative comparison of multiple ChIP-seq datasets.\n \n \n \n\n\n \n Chen, L.; Wang, C.; Qin, Z. S; and Wu, H.\n\n\n \n\n\n\n
Bioinformatics, 31(12): 1889–1896. 2015.\n
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@article{chen2015novel,\n title={A novel statistical method for quantitative comparison of multiple ChIP-seq datasets},\n author={Chen, Li and Wang, Chi and Qin, Zhaohui S and Wu, Hao},\n journal={Bioinformatics},\n volume={31},\n number={12},\n pages={1889--1896},\n year={2015},\n publisher={Oxford University Press}\n}\n\n
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\n\n \n \n \n \n \n Base-resolution methylation patterns accurately predict transcription factor bindings in vivo.\n \n \n \n\n\n \n Xu, T.; Li, B.; Zhao, M.; Szulwach, K. E; Street, R C.; Lin, L.; Yao, B.; Zhang, F.; Jin, P.; Wu, H.; and others\n\n\n \n\n\n\n
Nucleic acids research, 43(5): 2757–2766. 2015.\n
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@article{xu2015base,\n title={Base-resolution methylation patterns accurately predict transcription factor bindings in vivo},\n author={Xu, Tianlei and Li, Ben and Zhao, Meng and Szulwach, Keith E and Street, R Craig and Lin, Li and Yao, Bing and Zhang, Feiran and Jin, Peng and Wu, Hao and others},\n journal={Nucleic acids research},\n volume={43},\n number={5},\n pages={2757--2766},\n year={2015},\n publisher={Oxford University Press}\n}\n\n
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\n\n \n \n \n \n \n Detection of differentially methylated regions from whole-genome bisulfite sequencing data without replicates.\n \n \n \n\n\n \n Wu, H.; Xu, T.; Feng, H.; Chen, L.; Li, B.; Yao, B.; Qin, Z.; Jin, P.; and Conneely, K. N\n\n\n \n\n\n\n
Nucleic acids research, 43(21): e141–e141. 2015.\n
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@article{wu2015detection,\n title={Detection of differentially methylated regions from whole-genome bisulfite sequencing data without replicates},\n author={Wu, Hao and Xu, Tianlei and Feng, Hao and Chen, Li and Li, Ben and Yao, Bing and Qin, Zhaohui and Jin, Peng and Conneely, Karen N},\n journal={Nucleic acids research},\n volume={43},\n number={21},\n pages={e141--e141},\n year={2015},\n publisher={Oxford University Press}\n}\n\n
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\n\n \n \n \n \n \n Cell-cycle control of bivalent epigenetic domains regulates the exit from pluripotency.\n \n \n \n\n\n \n Singh, A. M; Sun, Y.; Li, L.; Zhang, W.; Wu, T.; Zhao, S.; Qin, Z.; and Dalton, S.\n\n\n \n\n\n\n
Stem cell reports, 5(3): 323–336. 2015.\n
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@article{singh2015cell,\n title={Cell-cycle control of bivalent epigenetic domains regulates the exit from pluripotency},\n author={Singh, Amar M and Sun, Yuhua and Li, Li and Zhang, Wenjuan and Wu, Tianming and Zhao, Shaying and Qin, Zhaohui and Dalton, Stephen},\n journal={Stem cell reports},\n volume={5},\n number={3},\n pages={323--336},\n year={2015},\n publisher={Cell Press}\n}\n\n
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\n\n \n \n \n \n \n One Size Doesn't Fit All-RefEditor: Building Personalized Diploid Reference Genome to Improve Read Mapping and Genotype Calling in Next Generation Sequencing Studies.\n \n \n \n\n\n \n Yuan, S.; Johnston, H R.; Zhang, G.; Li, Y.; Hu, Y.; and Qin, Z. S\n\n\n \n\n\n\n
PLoS computational biology, 11(8): e1004448. 2015.\n
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@article{yuan2015one,\n title={One Size Doesn't Fit All-RefEditor: Building Personalized Diploid Reference Genome to Improve Read Mapping and Genotype Calling in Next Generation Sequencing Studies},\n author={Yuan, Shuai and Johnston, H Richard and Zhang, Guosheng and Li, Yun and Hu, Yi-Juan and Qin, Zhaohui S},\n journal={PLoS computational biology},\n volume={11},\n number={8},\n pages={e1004448},\n year={2015},\n publisher={Public Library of Science}\n}\n\n
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\n\n \n \n \n \n \n The Value Of Whole Genome Sequencing In Identifying Genetic Determinants Of Asthma In Populations Of African Ancestry.\n \n \n \n\n\n \n Mathias, R. A; Johnston, H. R; Torgerson, D.; Levin, A. M; Lange, L. A; Ortega, V. E; Hu, Y.; Caraballo, L.; Foreman, M. G; Hartert, T.; and others\n\n\n \n\n\n\n In
A21. GENETIC REGULATION OF CHRONIC AIRWAY INFLAMMATION, pages A1063–A1063. American Thoracic Society, 2015.\n
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@incollection{mathias2015value,\n title={The Value Of Whole Genome Sequencing In Identifying Genetic Determinants Of Asthma In Populations Of African Ancestry},\n author={Mathias, Rasika A and Johnston, Henry R and Torgerson, Dara and Levin, Albert M and Lange, Leslie A and Ortega, Victor E and Hu, Yijuan and Caraballo, Luis and Foreman, Marilyn G and Hartert, Tina and others},\n booktitle={A21. GENETIC REGULATION OF CHRONIC AIRWAY INFLAMMATION},\n pages={A1063--A1063},\n year={2015},\n publisher={American Thoracic Society}\n}\n\n
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\n\n \n \n \n \n \n A hidden Markov random field-based Bayesian method for the detection of long-range chromosomal interactions in Hi-C data.\n \n \n \n\n\n \n Xu, Z.; Zhang, G.; Jin, F.; Chen, M.; Furey, T. S; Sullivan, P. F; Qin, Z.; Hu, M.; and Li, Y.\n\n\n \n\n\n\n
Bioinformatics, 32(5): 650–656. 2015.\n
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@article{xu2015hidden,\n title={A hidden Markov random field-based Bayesian method for the detection of long-range chromosomal interactions in Hi-C data},\n author={Xu, Zheng and Zhang, Guosheng and Jin, Fulai and Chen, Mengjie and Furey, Terrence S and Sullivan, Patrick F and Qin, Zhaohui and Hu, Ming and Li, Yun},\n journal={Bioinformatics},\n volume={32},\n number={5},\n pages={650--656},\n year={2015},\n publisher={Oxford University Press}\n}\n\n
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\n\n \n \n \n \n \n A Multi-Ethnic Genotyping Array for the Next Generation of Association Studies.\n \n \n \n\n\n \n Gignoux, C. R; Wojcik, G. L; Johnston, H R.; Fuchsberger, C.; Shringarpure, S.; Martin, A. R; Rosse, S.; Zubair, N.; Taliun, D.; Welch, R.; and others\n\n\n \n\n\n\n In
GENETIC EPIDEMIOLOGY, volume 39, pages 551–552, 2015. WILEY-BLACKWELL 111 RIVER ST, HOBOKEN 07030-5774, NJ USA\n
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@inproceedings{gignoux2015multi,\n title={A Multi-Ethnic Genotyping Array for the Next Generation of Association Studies},\n author={Gignoux, Christopher R and Wojcik, Genevieve L and Johnston, H Rich and Fuchsberger, Christian and Shringarpure, Suyash and Martin, Alicia R and Rosse, Stephanie and Zubair, Niha and Taliun, Daniel and Welch, Ryan and others},\n booktitle={GENETIC EPIDEMIOLOGY},\n volume={39},\n number={7},\n pages={551--552},\n year={2015},\n organization={WILEY-BLACKWELL 111 RIVER ST, HOBOKEN 07030-5774, NJ USA}\n}\n\n
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\n\n \n \n \n \n \n Enabling improved low frequency variant imputation in multi-ethnic studies.\n \n \n \n\n\n \n Wojcik, G. L; Gignoux, C. R; Fuchsberger, C.; Taliun, D.; Welch, R.; Martin, A. R; Johnston, H. R; Shringarpure, S.; Pethiyagoda, C.; O'Connell, J.; and others\n\n\n \n\n\n\n In
GENETIC EPIDEMIOLOGY, volume 39, pages 593–593, 2015. WILEY-BLACKWELL 111 RIVER ST, HOBOKEN 07030-5774, NJ USA\n
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@inproceedings{wojcik2015enabling,\n title={Enabling improved low frequency variant imputation in multi-ethnic studies},\n author={Wojcik, Genevieve L and Gignoux, Christopher R and Fuchsberger, Christian and Taliun, Daniel and Welch, Ryan and Martin, Alicia R and Johnston, Henry R and Shringarpure, Suyash and Pethiyagoda, Charit and O'Connell, Jared and others},\n booktitle={GENETIC EPIDEMIOLOGY},\n volume={39},\n number={7},\n pages={593--593},\n year={2015},\n organization={WILEY-BLACKWELL 111 RIVER ST, HOBOKEN 07030-5774, NJ USA}\n}\n\n
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\n\n \n \n \n \n \n 647 Genome-Wide Binding Studies of Acetyl-STAT3 Demonstrates a Novel Regulatory Pathway in Dendritic Cells.\n \n \n \n\n\n \n Sun, Y.\n\n\n \n\n\n\n . 2015.\n
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@article{sun2015647,\n title={647 Genome-Wide Binding Studies of Acetyl-STAT3 Demonstrates a Novel Regulatory Pathway in Dendritic Cells},\n author={Sun, Yaping},\n year={2015}\n}\n\n
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\n\n \n \n \n \n \n Comprehensive characterization of the genomic alterations in human gastric cancer.\n \n \n \n\n\n \n Cui, J.; Yin, Y.; Ma, Q.; Wang, G.; Olman, V.; Zhang, Y.; Chou, W.; Hong, C. S; Zhang, C.; Cao, S.; and others\n\n\n \n\n\n\n
International journal of cancer, 137(1): 86–95. 2015.\n
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@article{cui2015comprehensive,\n title={Comprehensive characterization of the genomic alterations in human gastric cancer},\n author={Cui, Juan and Yin, Yanbin and Ma, Qin and Wang, Guoqing and Olman, Victor and Zhang, Yu and Chou, Wen-Chi and Hong, Celine S and Zhang, Chi and Cao, Sha and others},\n journal={International journal of cancer},\n volume={137},\n number={1},\n pages={86--95},\n year={2015},\n publisher={Wiley Online Library}\n}\n\n
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\n\n \n \n \n \n \n A preclinical evaluation of SKLB261.\n \n \n \n\n\n \n Li, L; Lyu, X; Hou, C; Takenaka, N; Nguyen, H.; Ong, C.; Cubenas-Potts, C; Hu, M; Lei, E.; Bosco, G; and others\n\n\n \n\n\n\n
Molecular Cancer Therapeutics, 14(2): 407–418. 2015.\n
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@article{li2015preclinical,\n title={A preclinical evaluation of SKLB261},\n author={Li, L and Lyu, X and Hou, C and Takenaka, N and Nguyen, HQ and Ong, C-T and Cubenas-Potts, C and Hu, M and Lei, EP and Bosco, G and others},\n journal={Molecular Cancer Therapeutics},\n volume={14},\n number={2},\n pages={407--418},\n year={2015}\n}\n\n
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\n\n \n \n \n \n \n A21 GENETIC REGULATION OF CHRONIC AIRWAY INFLAMMATION: The Value Of Whole Genome Sequencing In Identifying Genetic Determinants Of Asthma In Populations Of African Ancestry.\n \n \n \n\n\n \n Mathias, R.; Johnston, H.; Torgerson, D; Levin, A.; Lange, L.; Ortega, V.; Hu, Y; Caraballo, L; Foreman, M.; Hartert, T; and others\n\n\n \n\n\n\n
American Journal of Respiratory and Critical Care Medicine, 191: 1. 2015.\n
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@article{mathias2015a21,\n title={A21 GENETIC REGULATION OF CHRONIC AIRWAY INFLAMMATION: The Value Of Whole Genome Sequencing In Identifying Genetic Determinants Of Asthma In Populations Of African Ancestry},\n author={Mathias, RA and Johnston, HR and Torgerson, D and Levin, AM and Lange, LA and Ortega, VE and Hu, Y and Caraballo, L and Foreman, MG and Hartert, T and others},\n journal={American Journal of Respiratory and Critical Care Medicine},\n volume={191},\n pages={1},\n year={2015},\n publisher={American Thoracic Society}\n}\n\n
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