InterPreTS: protein interaction prediction through tertiary structure. Aloy, P. & Russell, R. B Bioinformatics (Oxford, England), 19(1):161–162, 2003. abstract bibtex SUMMARY: InterPreTS (Interaction Prediction through Tertiary Structure) is a web-based version of our method for predicting protein-protein interactions (Aloy and Russell, 2002, PROC: Natl Acad. Sci. USA, 99, 5896-5901). Given a pair of query sequences, we first search for homologues in a database of interacting domains (DBID) of known three-dimensional complex structures. Pairs of sequences homologous to a known interacting pair are scored for how well they preserve the atomic contacts at the interaction interface. InterPreTS includes a useful interface for visualising molecular details of any predicted interaction. AVAILABILITY: http://www.russell.embl.de/interprets.
@article{aloy_interprets:_2003,
title = {{InterPreTS}: protein interaction prediction through tertiary structure},
volume = {19},
abstract = {SUMMARY: InterPreTS (Interaction Prediction through Tertiary Structure) is a web-based version of our method for predicting protein-protein interactions (Aloy and Russell, 2002, PROC: Natl Acad. Sci. USA, 99, 5896-5901). Given a pair of query sequences, we first search for homologues in a database of interacting domains (DBID) of known three-dimensional complex structures. Pairs of sequences homologous to a known interacting pair are scored for how well they preserve the atomic contacts at the interaction interface. InterPreTS includes a useful interface for visualising molecular details of any predicted interaction. AVAILABILITY: http://www.russell.embl.de/interprets.},
language = {eng},
number = {1},
journal = {Bioinformatics (Oxford, England)},
author = {Aloy, Patrick and Russell, Robert B},
year = {2003},
pmid = {12499311},
pages = {161--162},
}
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