{"_id":"5zgMD3gg7fsthH4Jt","bibbaseid":"andreychenko-mikeev-spieler-wolf-parameteridentificationformarkovmodelsofbiochemicalreactions-2011","author_short":["Andreychenko, A.","Mikeev, L.","Spieler, D.","Wolf, V."],"bibdata":{"title":"Parameter identification for Markov models of biochemical reactions","type":"book","year":"2011","source":"Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)","volume":"6806 LNCS","id":"9abc68a3-b901-391a-8e8f-8fa8b3cb7073","created":"2017-12-21T13:50:26.265Z","file_attached":false,"profile_id":"bbb99b2d-2278-3254-820f-2de6d915ce63","last_modified":"2017-12-21T13:50:26.265Z","read":false,"starred":false,"authored":"true","confirmed":false,"hidden":false,"private_publication":false,"abstract":"We propose a numerical technique for parameter inference in Markov models of biological processes. Based on time-series data of a process we estimate the kinetic rate constants by maximizing the likelihood of the data. The computation of the likelihood relies on a dynamic abstraction of the discrete state space of the Markov model which successfully mitigates the problem of state space largeness. We compare two variants of our method to state-of-the-art, recently published methods and demonstrate their usefulness and efficiency on several case studies from systems biology. © 2011 Springer-Verlag.","bibtype":"book","author":"Andreychenko, A. and Mikeev, L. and Spieler, D. and Wolf, V.","doi":"10.1007/978-3-642-22110-1_8","bibtex":"@book{\n title = {Parameter identification for Markov models of biochemical reactions},\n type = {book},\n year = {2011},\n source = {Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)},\n volume = {6806 LNCS},\n id = {9abc68a3-b901-391a-8e8f-8fa8b3cb7073},\n created = {2017-12-21T13:50:26.265Z},\n file_attached = {false},\n profile_id = {bbb99b2d-2278-3254-820f-2de6d915ce63},\n last_modified = {2017-12-21T13:50:26.265Z},\n read = {false},\n starred = {false},\n authored = {true},\n confirmed = {false},\n hidden = {false},\n private_publication = {false},\n abstract = {We propose a numerical technique for parameter inference in Markov models of biological processes. Based on time-series data of a process we estimate the kinetic rate constants by maximizing the likelihood of the data. The computation of the likelihood relies on a dynamic abstraction of the discrete state space of the Markov model which successfully mitigates the problem of state space largeness. We compare two variants of our method to state-of-the-art, recently published methods and demonstrate their usefulness and efficiency on several case studies from systems biology. © 2011 Springer-Verlag.},\n bibtype = {book},\n author = {Andreychenko, A. and Mikeev, L. and Spieler, D. and Wolf, V.},\n doi = {10.1007/978-3-642-22110-1_8}\n}","author_short":["Andreychenko, A.","Mikeev, L.","Spieler, D.","Wolf, V."],"biburl":"https://bibbase.org/service/mendeley/bbb99b2d-2278-3254-820f-2de6d915ce63","bibbaseid":"andreychenko-mikeev-spieler-wolf-parameteridentificationformarkovmodelsofbiochemicalreactions-2011","role":"author","urls":{},"metadata":{"authorlinks":{}}},"bibtype":"book","biburl":"https://bibbase.org/service/mendeley/bbb99b2d-2278-3254-820f-2de6d915ce63","dataSources":["5u2EFGtZ3pCiduxDD","dXRJbWa2wiNDJKxYE","qA8W3BSHDuk7cCNvk","2252seNhipfTmjEBQ"],"keywords":[],"search_terms":["parameter","identification","markov","models","biochemical","reactions","andreychenko","mikeev","spieler","wolf"],"title":"Parameter identification for Markov models of biochemical reactions","year":2011}