{"_id":"HYATeJc7b6hwwmjdv","bibbaseid":"anonymous-singlenucleotidepolymorphisminalocalpopulationoftrichophytonrubrum-2018","bibdata":{"bibtype":"article","type":"article","author":[{"propositions":[],"lastnames":["Pchelin"],"firstnames":["I.M."],"suffixes":[]},{"propositions":[],"lastnames":["Azarov"],"firstnames":["D.V."],"suffixes":[]},{"propositions":[],"lastnames":["Chilina"],"firstnames":["G.A."],"suffixes":[]},{"propositions":[],"lastnames":["Dmitriev"],"firstnames":["K.A."],"suffixes":[]},{"propositions":[],"lastnames":["Vasilyeva"],"firstnames":["N.V."],"suffixes":[]},{"propositions":[],"lastnames":["Taraskina"],"firstnames":["A.E."],"suffixes":[]}],"title":"Single-nucleotide polymorphism in a local population of Trichophyton rubrum","journal":"Medical Mycology","year":"2018","volume":"56","number":"1","pages":"125-128","doi":"10.1093/mmy/myx009","note":"cited By 0","url":"https://www.scopus.com/inward/record.uri?eid=2-s2.0-85042092942&doi=10.1093%2fmmy%2fmyx009&partnerID=40&md5=068c1ae151b5b21f497b95abe30789f0","affiliation":"Kashkin Research Institute of Medical Mycology, North-Western State Medical University, St. Petersburg, Russian Federation; Department of Epidemiology, Parasitology and Disinfectology, North-Western State Medical University named after I.I. Mechnikov, St. Petersburg, Russian Federation","abstract":"Trichophyton rubrum is an important causative agent of superficial mycoses worldwide. To uncover a genetic composition of a local population of this fungus, we sequenced A7C99 6411 and A7C99 6714 loci, coding for hypothetical proteins and revealed two complex genotypes, differing by a single missense mutation in each locus. One of the two A7C99 6411/6714 genotypes was not found in tinea pedis cases and demonstrated mostly longer TRS-1 elements when compared to another genotype. Thus, we present a description of nucleotide polymorphism in protein-coding loci in T. rubrum and provide evidence for ecological preferences of T. rubrum genotypes at a local scale. © The Author 2017. Published by Oxford University Press on behalf of The International Society for Human and Animal Mycology.","author_keywords":"Dermatophyte; Epidemiology; NTS typing; SNP; Tinea pedis","funding_details":"Российский Фонд Фундаментальных Исследований (РФФИ)16-54-53109","key":"Pchelin2018125","id":"Pchelin2018125","bibbaseid":"anonymous-singlenucleotidepolymorphisminalocalpopulationoftrichophytonrubrum-2018","role":"author","urls":{"Paper":"https://www.scopus.com/inward/record.uri?eid=2-s2.0-85042092942&doi=10.1093%2fmmy%2fmyx009&partnerID=40&md5=068c1ae151b5b21f497b95abe30789f0"},"metadata":{"authorlinks":{}}},"bibtype":"article","biburl":"https://bio.pnpi.nrcki.ru/wp-content/uploads/2019/12/lmgch_2019_10.txt","dataSources":["87fXC3NAxFNMB5YTH"],"keywords":[],"search_terms":["single","nucleotide","polymorphism","local","population","trichophyton","rubrum"],"title":"Single-nucleotide polymorphism in a local population of Trichophyton rubrum","year":2018}