Comprehensive analysis of DNA methylation data with RnBeads. Assenov, Y., Müller, F., Lutsik, P., Walter, J., Lengauer, T., & Bock, C. Nature methods, 11(11):1138 – 1140, 2014.
doi  abstract   bibtex   
RnBeads is a software tool for large-scale analysis and interpretation of DNA methylation data, providing a user-friendly analysis workflow that yields detailed hypertext reports (http://rnbeads.mpi-inf.mpg.de/). Supported assays include whole-genome bisulfite sequencing, reduced representation bisulfite sequencing, Infinium microarrays and any other protocol that produces high-resolution DNA methylation data. Notable applications of RnBeads include the analysis of epigenome-wide association studies and epigenetic biomarker discovery in cancer cohorts.
@article{Assenov:2014rxh, 
title = {{Comprehensive analysis of DNA methylation data with RnBeads}}, 
author = {Assenov, Yassen and Müller, Fabian and Lutsik, Pavlo and Walter, Jörn and Lengauer, Thomas and Bock, Christoph}, 
journal = {Nature methods}, 
doi = {10.1038/nmeth.3115}, 
abstract = {{RnBeads is a software tool for large-scale analysis and interpretation of DNA methylation data, providing a user-friendly analysis workflow that yields detailed hypertext reports (http://rnbeads.mpi-inf.mpg.de/). Supported assays include whole-genome bisulfite sequencing, reduced representation bisulfite sequencing, Infinium microarrays and any other protocol that produces high-resolution DNA methylation data. Notable applications of RnBeads include the analysis of epigenome-wide association studies and epigenetic biomarker discovery in cancer cohorts.}}, 
pages = {1138 -- 1140}, 
number = {11}, 
volume = {11}, 
language = {English}, 
local-url = {file://localhost/Users/fm/Documents/Papers%20Library/2014/Nature%20methods/2014_Assenov_Nature%20methods.pdf}, 
year = {2014}, 
rating = {0}
}

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