The method of integrated kinetics and its applicability to the exo-glycosidase-catalyzed hydrolyses of p-nitrophenyl glycosides. Borisova, A., Reddy, S., Ivanen, D., Bobrov, K., Eneyskaya, E., Rychkov, G., Sandgren, M., Stålbrand, H., Sinnott, M., Kulminskaya, A., & Shabalin, K. Carbohydrate Research, 412:43-49, 2015. cited By 2
The method of integrated kinetics and its applicability to the exo-glycosidase-catalyzed hydrolyses of p-nitrophenyl glycosides [link]Paper  doi  abstract   bibtex   
In the present work we suggest an efficient method, using the whole time course of the reaction, whereby parameters kcat, Km and product KI for the hydrolysis of a p-nitrophenyl glycoside by an exo-acting glycoside hydrolase can be estimated in a single experiment. Its applicability was demonstrated for three retaining exo-glycoside hydrolases, β-xylosidase from Aspergillus awamori, β-galactosidase from Penicillium sp. and α-galactosidase from Thermotoga maritima (TmGalA). During the analysis of the reaction course catalyzed by the TmGalA enzyme we had observed that a non-enzymatic process, mutarotation of the liberated α-d-galactose, affected the reaction significantly. © 2015 Elsevier Ltd. All rights reserved.
@ARTICLE{Borisova201543,
author={Borisova, A.S. and Reddy, S.K. and Ivanen, D.R. and Bobrov, K.S. and Eneyskaya, E.V. and Rychkov, G.N. and Sandgren, M. and Stålbrand, H. and Sinnott, M.L. and Kulminskaya, A.A. and Shabalin, K.A.},
title={The method of integrated kinetics and its applicability to the exo-glycosidase-catalyzed hydrolyses of p-nitrophenyl glycosides},
journal={Carbohydrate Research},
year={2015},
volume={412},
pages={43-49},
doi={10.1016/j.carres.2015.03.021},
note={cited By 2},
url={https://www.scopus.com/inward/record.uri?eid=2-s2.0-84929649802&doi=10.1016%2fj.carres.2015.03.021&partnerID=40&md5=f216c9f632b9a6d57c20a434a9dbc525},
affiliation={National Research Center Kurchatov Institute, B.P. Konstantinov Petersburg Nuclear Physics Institute, Gatchina, Orlova roscha, 188300, Russian Federation; Department of Chemistry and Biotechnology, Swedish University of Agricultural Sciences, Uppsala, Sweden; Department of Biochemistry and Structural Biology, Lund University, Lund, S-221 00, Sweden; Department of Chemical Sciences, University of Huddersfield, Queensgate, Huddersfield, HD1 3DH, United Kingdom; St. Petersburg State Polytechnical University, 29 Politekhnicheskaya st., St. Petersburg, 195251, Russian Federation},
abstract={In the present work we suggest an efficient method, using the whole time course of the reaction, whereby parameters k<inf>cat</inf>, K<inf>m</inf> and product K<inf>I</inf> for the hydrolysis of a p-nitrophenyl glycoside by an exo-acting glycoside hydrolase can be estimated in a single experiment. Its applicability was demonstrated for three retaining exo-glycoside hydrolases, β-xylosidase from Aspergillus awamori, β-galactosidase from Penicillium sp. and α-galactosidase from Thermotoga maritima (TmGalA). During the analysis of the reaction course catalyzed by the TmGalA enzyme we had observed that a non-enzymatic process, mutarotation of the liberated α-d-galactose, affected the reaction significantly. © 2015 Elsevier Ltd. All rights reserved.},
author_keywords={Integrated kinetics;  Mutarotation;  Retaining glycoside hydrolase},
funding_details={Российский Фонд Фундаментальных Исследований (РФФИ)12-08-00813-a},
}

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