Full reconstruction of Markov models on evolutionary trees: identifiability and consistency. Chang, J. T Mathematical biosciences, 137(1):51–73, Elsevier, 1996.
bibtex   
@Article{chang96full,
  author    = {Chang, Joseph T},
  title     = {Full reconstruction of Markov models on evolutionary trees: identifiability and consistency},
  journal   = {Mathematical biosciences},
  year      = {1996},
  volume    = {137},
  number    = {1},
  pages     = {51--73},
  publisher = {Elsevier},
}

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