Determination of conifer age biomarker DAL1 interactome using Y2H-seq. Chen, X., Zhu, Q., Nie, Y., Han, F., Li, Y., Wu, H. X., & Niu, S. Forestry Research, 1(1):1–12, July, 2021. Paper doi abstract bibtex 2 downloads Age is a sophisticated physiological signal that ensures the sequence of different developmental stages in organisms. The regulation of ageing pathways appears to differ between gymnosperms and angiosperms. We previously identified DAL1 as a conserved conifer age biomarker that plays a crucial role in the transition from vegetative to reproductive life-history phases in pines. Therefore, elucidating the specific interaction events related to DAL1 is key to understanding how age drives conifer development. Large-scale yeast two-hybrid (Y2H) analysis followed by next-generation high-throughput sequencing (Y2H-seq) allowed us to identify 135 PtDAL1 interacting proteins in Pinus tabuliformis. Our study found that PtDAL1 interacting proteins showed an ageing-related module, with sophisticated interacting networks composed of transcription factors (TFs), transcriptional regulators (TRs), and kinases. These interacting proteins are produced in response to a variety of phytohormones and environmental signals, and are likely involved in wood formation, needle development, oleoresin terpenoids biosynthesis, and reproductive development. In this study, we propose a novel regulation model of conifer ageing pathways whereby PtDAL1 coordinates different environmental stimuli and interacts with corresponding proteins to regulate appropriate development.
@article{chen_determination_2021,
title = {Determination of conifer age biomarker {DAL1} interactome using {Y2H}-seq},
volume = {1},
copyright = {2021 The Author(s)},
issn = {2767-3812},
url = {http://www.maxapress.com/rticle/doi/10.48130/FR-2021-0012},
doi = {10/gnj3pg},
abstract = {Age is a sophisticated physiological signal that ensures the sequence of different developmental stages in organisms. The regulation of ageing pathways appears to differ between gymnosperms and angiosperms. We previously identified \textit{DAL1} as a conserved conifer age biomarker that plays a crucial role in the transition from vegetative to reproductive life-history phases in pines. Therefore, elucidating the specific interaction events related to DAL1 is key to understanding how age drives conifer development. Large-scale yeast two-hybrid (Y2H) analysis followed by next-generation high-throughput sequencing (Y2H-seq) allowed us to identify 135 PtDAL1 interacting proteins in \textit{Pinus tabuliformis}. Our study found that PtDAL1 interacting proteins showed an ageing-related module, with sophisticated interacting networks composed of transcription factors (TFs), transcriptional regulators (TRs), and kinases. These interacting proteins are produced in response to a variety of phytohormones and environmental signals, and are likely involved in wood formation, needle development, oleoresin terpenoids biosynthesis, and reproductive development. In this study, we propose a novel regulation model of conifer ageing pathways whereby PtDAL1 coordinates different environmental stimuli and interacts with corresponding proteins to regulate appropriate development.},
language = {en},
number = {1},
urldate = {2021-11-22},
journal = {Forestry Research},
author = {Chen, Xi and Zhu, Qianya and Nie, Yumeng and Han, Fangxu and Li, Yue and Wu, Harry X. and Niu, Shihui},
month = jul,
year = {2021},
pages = {1--12},
}
Downloads: 2
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Therefore, elucidating the specific interaction events related to DAL1 is key to understanding how age drives conifer development. Large-scale yeast two-hybrid (Y2H) analysis followed by next-generation high-throughput sequencing (Y2H-seq) allowed us to identify 135 PtDAL1 interacting proteins in <i>Pinus tabuliformis</i>. Our study found that PtDAL1 interacting proteins showed an ageing-related module, with sophisticated interacting networks composed of transcription factors (TFs), transcriptional regulators (TRs), and kinases. These interacting proteins are produced in response to a variety of phytohormones and environmental signals, and are likely involved in wood formation, needle development, oleoresin terpenoids biosynthesis, and reproductive development. In this study, we propose a novel regulation model of conifer ageing pathways whereby PtDAL1 coordinates different environmental stimuli and interacts with corresponding proteins to regulate appropriate development.","language":"en","number":"1","urldate":"2021-11-22","journal":"Forestry Research","author":[{"propositions":[],"lastnames":["Chen"],"firstnames":["Xi"],"suffixes":[]},{"propositions":[],"lastnames":["Zhu"],"firstnames":["Qianya"],"suffixes":[]},{"propositions":[],"lastnames":["Nie"],"firstnames":["Yumeng"],"suffixes":[]},{"propositions":[],"lastnames":["Han"],"firstnames":["Fangxu"],"suffixes":[]},{"propositions":[],"lastnames":["Li"],"firstnames":["Yue"],"suffixes":[]},{"propositions":[],"lastnames":["Wu"],"firstnames":["Harry","X."],"suffixes":[]},{"propositions":[],"lastnames":["Niu"],"firstnames":["Shihui"],"suffixes":[]}],"month":"July","year":"2021","pages":"1–12","bibtex":"@article{chen_determination_2021,\n\ttitle = {Determination of conifer age biomarker {DAL1} interactome using {Y2H}-seq},\n\tvolume = {1},\n\tcopyright = {2021 The Author(s)},\n\tissn = {2767-3812},\n\turl = {http://www.maxapress.com/rticle/doi/10.48130/FR-2021-0012},\n\tdoi = {10/gnj3pg},\n\tabstract = {Age is a sophisticated physiological signal that ensures the sequence of different developmental stages in organisms. 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