BioTIME: A database of biodiversity time series for the Anthropocene. Dornelas, M., Antão, L. H., Moyes, F., Bates, A. E., Magurran, A. E., Adam, D., Akhmetzhanova, A. A., Appeltans, W., Arcos, J. M., Arnold, H., Ayyappan, N., Badihi, G., Baird, A. H., Barbosa, M., Barreto, T. E., Bässler, C., Bellgrove, A., Belmaker, J., Benedetti‐Cecchi, L., Bett, B. J., Bjorkman, A. D., Błażewicz, M., Blowes, S. A., Bloch, C. P., Bonebrake, T. C., Boyd, S., Bradford, M., Brooks, A. J., Brown, J. H., Bruelheide, H., Budy, P., Carvalho, F., Castañeda‐Moya, E., Chen, C. A., Chamblee, J. F., Chase, T. J., Collier, L. S., Collinge, S. K., Condit, R., Cooper, E. J., Cornelissen, J. H. C., Cotano, U., Crow, S. K., Damasceno, G., Davies, C. H., Davis, R. A., Day, F. P., Degraer, S., Doherty, T. S., Dunn, T. E., Durigan, G., Duffy, J. E., Edelist, D., Edgar, G. J., Elahi, R., Elmendorf, S. C., Enemar, A., Ernest, S. K. M., Escribano, R., Estiarte, M., Evans, B. S., Fan, T., Farah, F. T., Fernandes, L. L., Farneda, F. Z., Fidelis, A., Fitt, R., Fosaa, A. M., Franco, G. A. D. C., Frank, G. E., Fraser, W. R., García, H., Gatti, R. C., Givan, O., Gorgone‐Barbosa, E., Gould, W. A., Gries, C., Grossman, G. D., Gutierréz, J. R., Hale, S., Harmon, M. E., Harte, J., Haskins, G., Henshaw, D. L., Hermanutz, L., Hidalgo, P., Higuchi, P., Hoey, A., Hoey, G. V., Hofgaard, A., Holeck, K., Hollister, R. D., Holmes, R., Hoogenboom, M., Hsieh, C., Hubbell, S. P., Huettmann, F., Huffard, C. L., Hurlbert, A. H., Ivanauskas, N. M., Janík, D., Jandt, U., Jażdżewska, A., Johannessen, T., Johnstone, J., Jones, J., Jones, F. A. M., Kang, J., Kartawijaya, T., Keeley, E. C., Kelt, D. A., Kinnear, R., Klanderud, K., Knutsen, H., Koenig, C. C., Kortz, A. R., Král, K., Kuhnz, L. A., Kuo, C., Kushner, D. J., Laguionie‐Marchais, C., Lancaster, L. T., Lee, C. M., Lefcheck, J. S., Lévesque, E., Lightfoot, D., Lloret, F., Lloyd, J. D., López‐Baucells, A., Louzao, M., Madin, J. S., Magnússon, B., Malamud, S., Matthews, I., McFarland, K. P., McGill, B., McKnight, D., McLarney, W. O., Meador, J., Meserve, P. L., Metcalfe, D. J., Meyer, C. F. J., Michelsen, A., Milchakova, N., Moens, T., Moland, E., Moore, J., Moreira, C. M., Müller, J., Murphy, G., Myers‐Smith, I. H., Myster, R. W., Naumov, A., Neat, F., Nelson, J. A., Nelson, M. P., Newton, S. F., Norden, N., Oliver, J. C., Olsen, E. M., Onipchenko, V. G., Pabis, K., Pabst, R. J., Paquette, A., Pardede, S., Paterson, D. M., Pélissier, R., Peñuelas, J., Pérez‐Matus, A., Pizarro, O., Pomati, F., Post, E., Prins, H. H. T., Priscu, J. C., Provoost, P., Prudic, K. L., Pulliainen, E., Ramesh, B. R., Ramos, O. M., Rassweiler, A., Rebelo, J. E., Reed, D. C., Reich, P. B., Remillard, S. M., Richardson, A. J., Richardson, J. P., Rijn, I. v., Rocha, R., Rivera‐Monroy, V. H., Rixen, C., Robinson, K. P., Rodrigues, R. R., Rossa‐Feres, D. d. C., Rudstam, L., Ruhl, H., Ruz, C. S., Sampaio, E. M., Rybicki, N., Rypel, A., Sal, S., Salgado, B., Santos, F. A. M., Savassi‐Coutinho, A. P., Scanga, S., Schmidt, J., Schooley, R., Setiawan, F., Shao, K., Shaver, G. R., Sherman, S., Sherry, T. W., Siciński, J., Sievers, C., Silva, A. C. d., Silva, F. R. d., Silveira, F. L., Slingsby, J., Smart, T., Snell, S. J., Soudzilovskaia, N. A., Souza, G. B. G., Souza, F. M., Souza, V. C., Stallings, C. D., Stanforth, R., Stanley, E. H., Sterza, J. M., Stevens, M., Stuart‐Smith, R., Suarez, Y. R., Supp, S., Tamashiro, J. Y., Tarigan, S., Thiede, G. P., Thorn, S., Tolvanen, A., Toniato, M. T. Z., Totland, Ø., Twilley, R. R., Vaitkus, G., Valdivia, N., Vallejo, M. I., Valone, T. J., Colen, C. V., Vanaverbeke, J., Venturoli, F., Verheye, H. M., Vianna, M., Vieira, R. P., Vrška, T., Vu, C. Q., Vu, L. V., Waide, R. B., Waldock, C., Watts, D., Webb, S., Wesołowski, T., White, E. P., Widdicombe, C. E., Wilgers, D., Williams, R., Williams, S. B., Williamson, M., Willig, M. R., Willis, T. J., Wipf, S., Woods, K. D., Woehler, E. J., Zawada, K., & Zettler, M. L. Global Ecology and Biogeography, 27(7):760–786, July, 2018.
BioTIME: A database of biodiversity time series for the Anthropocene [link]Paper  doi  abstract   bibtex   
Motivation The BioTIME database contains raw data on species identities and abundances in ecological assemblages through time. These data enable users to calculate temporal trends in biodiversity within and amongst assemblages using a broad range of metrics. BioTIME is being developed as a community-led open-source database of biodiversity time series. Our goal is to accelerate and facilitate quantitative analysis of temporal patterns of biodiversity in the Anthropocene. Main types of variables included The database contains 8,777,413 species abundance records, from assemblages consistently sampled for a minimum of 2 years, which need not necessarily be consecutive. In addition, the database contains metadata relating to sampling methodology and contextual information about each record. Spatial location and grain BioTIME is a global database of 547,161 unique sampling locations spanning the marine, freshwater and terrestrial realms. Grain size varies across datasets from 0.0000000158 km2 (158 cm2) to 100 km2 (1,000,000,000,000 cm2). Time period and grain BioTIME records span from 1874 to 2016. The minimal temporal grain across all datasets in BioTIME is a year. Major taxa and level of measurement BioTIME includes data from 44,440 species across the plant and animal kingdoms, ranging from plants, plankton and terrestrial invertebrates to small and large vertebrates. Software format .csv and .SQL.
@article{dornelas_biotime:_2018,
	title = {{BioTIME}: {A} database of biodiversity time series for the {Anthropocene}},
	volume = {27},
	copyright = {© 2018 The Authors.           Global Ecology and Biogeography Published by John Wiley \& Sons Ltd},
	issn = {1466-8238},
	shorttitle = {{BioTIME}},
	url = {https://onlinelibrary.wiley.com/doi/abs/10.1111/geb.12729},
	doi = {10.1111/geb.12729},
	abstract = {Motivation The BioTIME database contains raw data on species identities and abundances in ecological assemblages through time. These data enable users to calculate temporal trends in biodiversity within and amongst assemblages using a broad range of metrics. BioTIME is being developed as a community-led open-source database of biodiversity time series. Our goal is to accelerate and facilitate quantitative analysis of temporal patterns of biodiversity in the Anthropocene. Main types of variables included The database contains 8,777,413 species abundance records, from assemblages consistently sampled for a minimum of 2 years, which need not necessarily be consecutive. In addition, the database contains metadata relating to sampling methodology and contextual information about each record. Spatial location and grain BioTIME is a global database of 547,161 unique sampling locations spanning the marine, freshwater and terrestrial realms. Grain size varies across datasets from 0.0000000158 km2 (158 cm2) to 100 km2 (1,000,000,000,000 cm2). Time period and grain BioTIME records span from 1874 to 2016. The minimal temporal grain across all datasets in BioTIME is a year. Major taxa and level of measurement BioTIME includes data from 44,440 species across the plant and animal kingdoms, ranging from plants, plankton and terrestrial invertebrates to small and large vertebrates. Software format .csv and .SQL.},
	language = {en},
	number = {7},
	urldate = {2018-11-06TZ},
	journal = {Global Ecology and Biogeography},
	author = {Dornelas, Maria and Antão, Laura H. and Moyes, Faye and Bates, Amanda E. and Magurran, Anne E. and Adam, Dušan and Akhmetzhanova, Asem A. and Appeltans, Ward and Arcos, José Manuel and Arnold, Haley and Ayyappan, Narayanan and Badihi, Gal and Baird, Andrew H. and Barbosa, Miguel and Barreto, Tiago Egydio and Bässler, Claus and Bellgrove, Alecia and Belmaker, Jonathan and Benedetti‐Cecchi, Lisandro and Bett, Brian J. and Bjorkman, Anne D. and Błażewicz, Magdalena and Blowes, Shane A. and Bloch, Christopher P. and Bonebrake, Timothy C. and Boyd, Susan and Bradford, Matt and Brooks, Andrew J. and Brown, James H. and Bruelheide, Helge and Budy, Phaedra and Carvalho, Fernando and Castañeda‐Moya, Edward and Chen, Chaolun Allen and Chamblee, John F. and Chase, Tory J. and Collier, Laura Siegwart and Collinge, Sharon K. and Condit, Richard and Cooper, Elisabeth J. and Cornelissen, J. Hans C. and Cotano, Unai and Crow, Shannan Kyle and Damasceno, Gabriella and Davies, Claire H. and Davis, Robert A. and Day, Frank P. and Degraer, Steven and Doherty, Tim S. and Dunn, Timothy E. and Durigan, Giselda and Duffy, J. Emmett and Edelist, Dor and Edgar, Graham J. and Elahi, Robin and Elmendorf, Sarah C. and Enemar, Anders and Ernest, S. K. Morgan and Escribano, Rubén and Estiarte, Marc and Evans, Brian S. and Fan, Tung-Yung and Farah, Fabiano Turini and Fernandes, Luiz Loureiro and Farneda, Fábio Z. and Fidelis, Alessandra and Fitt, Robert and Fosaa, Anna Maria and Franco, Geraldo Antonio Daher Correa and Frank, Grace E. and Fraser, William R. and García, Hernando and Gatti, Roberto Cazzolla and Givan, Or and Gorgone‐Barbosa, Elizabeth and Gould, William A. and Gries, Corinna and Grossman, Gary D. and Gutierréz, Julio R. and Hale, Stephen and Harmon, Mark E. and Harte, John and Haskins, Gary and Henshaw, Donald L. and Hermanutz, Luise and Hidalgo, Pamela and Higuchi, Pedro and Hoey, Andrew and Hoey, Gert Van and Hofgaard, Annika and Holeck, Kristen and Hollister, Robert D. and Holmes, Richard and Hoogenboom, Mia and Hsieh, Chih-hao and Hubbell, Stephen P. and Huettmann, Falk and Huffard, Christine L. and Hurlbert, Allen H. and Ivanauskas, Natália Macedo and Janík, David and Jandt, Ute and Jażdżewska, Anna and Johannessen, Tore and Johnstone, Jill and Jones, Julia and Jones, Faith A. M. and Kang, Jungwon and Kartawijaya, Tasrif and Keeley, Erin C. and Kelt, Douglas A. and Kinnear, Rebecca and Klanderud, Kari and Knutsen, Halvor and Koenig, Christopher C. and Kortz, Alessandra R. and Král, Kamil and Kuhnz, Linda A. and Kuo, Chao-Yang and Kushner, David J. and Laguionie‐Marchais, Claire and Lancaster, Lesley T. and Lee, Cheol Min and Lefcheck, Jonathan S. and Lévesque, Esther and Lightfoot, David and Lloret, Francisco and Lloyd, John D. and López‐Baucells, Adrià and Louzao, Maite and Madin, Joshua S. and Magnússon, Borgþór and Malamud, Shahar and Matthews, Iain and McFarland, Kent P. and McGill, Brian and McKnight, Diane and McLarney, William O. and Meador, Jason and Meserve, Peter L. and Metcalfe, Daniel J. and Meyer, Christoph F. J. and Michelsen, Anders and Milchakova, Nataliya and Moens, Tom and Moland, Even and Moore, Jon and Moreira, Carolina Mathias and Müller, Jörg and Murphy, Grace and Myers‐Smith, Isla H. and Myster, Randall W. and Naumov, Andrew and Neat, Francis and Nelson, James A. and Nelson, Michael Paul and Newton, Stephen F. and Norden, Natalia and Oliver, Jeffrey C. and Olsen, Esben M. and Onipchenko, Vladimir G. and Pabis, Krzysztof and Pabst, Robert J. and Paquette, Alain and Pardede, Sinta and Paterson, David M. and Pélissier, Raphaël and Peñuelas, Josep and Pérez‐Matus, Alejandro and Pizarro, Oscar and Pomati, Francesco and Post, Eric and Prins, Herbert H. T. and Priscu, John C. and Provoost, Pieter and Prudic, Kathleen L. and Pulliainen, Erkki and Ramesh, B. R. and Ramos, Olivia Mendivil and Rassweiler, Andrew and Rebelo, Jose Eduardo and Reed, Daniel C. and Reich, Peter B. and Remillard, Suzanne M. and Richardson, Anthony J. and Richardson, J. Paul and Rijn, Itai van and Rocha, Ricardo and Rivera‐Monroy, Victor H. and Rixen, Christian and Robinson, Kevin P. and Rodrigues, Ricardo Ribeiro and Rossa‐Feres, Denise de Cerqueira and Rudstam, Lars and Ruhl, Henry and Ruz, Catalina S. and Sampaio, Erica M. and Rybicki, Nancy and Rypel, Andrew and Sal, Sofia and Salgado, Beatriz and Santos, Flavio A. M. and Savassi‐Coutinho, Ana Paula and Scanga, Sara and Schmidt, Jochen and Schooley, Robert and Setiawan, Fakhrizal and Shao, Kwang-Tsao and Shaver, Gaius R. and Sherman, Sally and Sherry, Thomas W. and Siciński, Jacek and Sievers, Caya and Silva, Ana Carolina da and Silva, Fernando Rodrigues da and Silveira, Fabio L. and Slingsby, Jasper and Smart, Tracey and Snell, Sara J. and Soudzilovskaia, Nadejda A. and Souza, Gabriel B. G. and Souza, Flaviana Maluf and Souza, Vinícius Castro and Stallings, Christopher D. and Stanforth, Rowan and Stanley, Emily H. and Sterza, José Mauro and Stevens, Maarten and Stuart‐Smith, Rick and Suarez, Yzel Rondon and Supp, Sarah and Tamashiro, Jorge Yoshio and Tarigan, Sukmaraharja and Thiede, Gary P. and Thorn, Simon and Tolvanen, Anne and Toniato, Maria Teresa Zugliani and Totland, Ørjan and Twilley, Robert R. and Vaitkus, Gediminas and Valdivia, Nelson and Vallejo, Martha Isabel and Valone, Thomas J. and Colen, Carl Van and Vanaverbeke, Jan and Venturoli, Fabio and Verheye, Hans M. and Vianna, Marcelo and Vieira, Rui P. and Vrška, Tomáš and Vu, Con Quang and Vu, Lien Van and Waide, Robert B. and Waldock, Conor and Watts, Dave and Webb, Sara and Wesołowski, Tomasz and White, Ethan P. and Widdicombe, Claire E. and Wilgers, Dustin and Williams, Richard and Williams, Stefan B. and Williamson, Mark and Willig, Michael R. and Willis, Trevor J. and Wipf, Sonja and Woods, Kerry D. and Woehler, Eric J. and Zawada, Kyle and Zettler, Michael L.},
	month = jul,
	year = {2018},
	keywords = {biodiversity, global, spatial, species richness, temporal, turnover},
	pages = {760--786}
}
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