Georeferenced Database of Genetic Diversity (GD)2 - User Manual. Ehrenmann, F. February, 2016.
abstract   bibtex   
[Excerpt: Objectives] This database contains genetic and georeferenced passport data of different genetic units that are traditionally analyzed by geneticists and ecologists. Genetic data include marker data (Microsatellites, Single nucletotide polymorphisms, PCR DNA fragments etc...) coming either from diploid or haploid tissue for wich genetic parameters have been calculated (allelic or nucleotide frequencies, diversity statistics). Passport data include all other data than genetic, ranging from geographic coordinates to ecological or physiographic data of the location of the genetic units. Genetic units are either single individuals or populations on which the genetic and passport data are recorded. [\n] Specific objectives of the applications are : [::1] Insert genetic and georeferenced data of natural populations [::2] View geographic distribution of data [::3] Export data to different format (CSV, GIS format, population genetic software format) for data analysis [\n] [...] [Organisation and technical informations] [::Technical informations] (GD)$^2$ is implemented in Ruby On Rails 2 and is optimized for Mozilla Firefox. Database is managed by PostgreSQL (version 8.4) and PostGIS. Maps are provided by Google MapsTM. [\n] [...] [::Functionalities] [::1] Viewer [\n] Main function of (GD)$^2$, the Viewer permits to display different informations on a geographical map. [...] [\n] [...] [::2] Export data [\n] Exportation is actually available for individual data, on allelic and (or) haplotypic frequencies. [...] [\n] [...] [::3] Import data [\n] The (GD)2 database (Georeferenced Database of Genetic Diversity) comprises georeferenced passport data and genetic data. Genetic data can be inserted at the individual level or at the population level. [...] [\n] [...]
@book{ehrenmannGeoreferencedDatabaseGenetic2016,
  title = {Georeferenced Database of Genetic Diversity ({{GD}})2 - {{User}} Manual},
  author = {Ehrenmann, Fran{\c c}ois},
  editor = {Kremer, Antoine},
  year = {2016},
  month = feb,
  abstract = {[Excerpt: Objectives]

This database contains genetic and georeferenced passport data of different genetic units that are traditionally analyzed by geneticists and ecologists. Genetic data include marker data (Microsatellites, Single nucletotide polymorphisms, PCR DNA fragments etc...) coming either from diploid or haploid tissue for wich genetic parameters have been calculated (allelic or nucleotide frequencies, diversity statistics). Passport data include all other data than genetic, ranging from geographic coordinates to ecological or physiographic data of the location of the genetic units. Genetic units are either single individuals or populations on which the genetic and passport data are recorded.

[\textbackslash n] Specific objectives of the applications are : [::1] Insert genetic and georeferenced data of natural populations [::2] View geographic distribution of data [::3] Export data to different format (CSV, GIS format, population genetic software format) for data analysis

[\textbackslash n] [...]

[Organisation and technical informations]

[::Technical informations] (GD){$^2$} is implemented in Ruby On Rails 2 and is optimized for Mozilla Firefox. Database is managed by PostgreSQL (version 8.4) and PostGIS. Maps are provided by Google MapsTM.

[\textbackslash n] [...]

[::Functionalities] [::1] Viewer [\textbackslash n] Main function of (GD){$^2$}, the Viewer permits to display different informations on a geographical map. [...]

[\textbackslash n] [...]

[::2] Export data

[\textbackslash n] Exportation is actually available for individual data, on allelic and (or) haplotypic frequencies. [...]

[\textbackslash n] [...]

[::3] Import data [\textbackslash n] The (GD)2 database (Georeferenced Database of Genetic Diversity) comprises georeferenced passport data and genetic data. Genetic data can be inserted at the individual level or at the population level. [...]

[\textbackslash n] [...]},
  keywords = {*imported-from-citeulike-INRMM,~INRMM-MiD:c-14040411,data,europe,forest-resources,genetic-diversity,reference-manual},
  lccn = {INRMM-MiD:c-14040411}
}

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