@article{RN181,
   author = {Endo, H. and Blanc-Mathieu, R. and Li, Y. and Salazar, G. and Henry, N. and Labadie, K. and de Vargas, C. and Sullivan, M. B. and Bowler, C. and Wincker, P. and Karp-Boss, L. and Sunagawa, S. and Ogata, H.},
   title = {Biogeography of marine giant viruses reveals their interplay with eukaryotes and ecological functions},
   journal = {Nat Ecol Evol},
   volume = {4},
   number = {12},
   pages = {1639-1649},
   note = {Endo, Hisashi
Blanc-Mathieu, Romain
Li, Yanze
Salazar, Guillem
Henry, Nicolas
Labadie, Karine
de Vargas, Colomban
Sullivan, Matthew B
Bowler, Chris
Wincker, Patrick
Karp-Boss, Lee
Sunagawa, Shinichi
Ogata, Hiroyuki
eng
Research Support, Non-U.S. Gov't
England
Nat Ecol Evol. 2020 Dec;4(12):1639-1649. doi: 10.1038/s41559-020-01288-w. Epub 2020 Sep 7.},
   abstract = {Nucleocytoplasmic large DNA viruses (NCLDVs) are ubiquitous in marine environments and infect diverse eukaryotes. However, little is known about their biogeography and ecology in the ocean. By leveraging the Tara Oceans pole-to-pole metagenomic data set, we investigated the distribution of NCLDVs across size fractions, depths and biomes, as well as their associations with eukaryotic communities. Our analyses reveal a heterogeneous distribution of NCLDVs across oceans, and a higher proportion of unique NCLDVs in the polar biomes. The community structures of NCLDV families correlate with specific eukaryotic lineages, including many photosynthetic groups. NCLDV communities are generally distinct between surface and mesopelagic zones, but at some locations they exhibit a high similarity between the two depths. This vertical similarity correlates to surface phytoplankton biomass but not to physical mixing processes, which suggests a potential role of vertical transport in structuring mesopelagic NCLDV communities. These results underscore the importance of the interactions between NCLDVs and eukaryotes in biogeochemical processes in the ocean.},
   keywords = {DNA Viruses
Eukaryota
*Giant Viruses/genetics
Humans
Oceans and Seas
Phylogeny},
   ISSN = {2397-334X (Electronic)
2397-334X (Linking)},
   DOI = {10.1038/s41559-020-01288-w},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/32895519},
   year = {2020},
   type = {Journal Article}
}

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B.","Bowler, C.","Wincker, P.","Karp-Boss, L.","Sunagawa, S.","Ogata, H."],"bibdata":{"bibtype":"article","type":"Journal Article","author":[{"propositions":[],"lastnames":["Endo"],"firstnames":["H."],"suffixes":[]},{"propositions":[],"lastnames":["Blanc-Mathieu"],"firstnames":["R."],"suffixes":[]},{"propositions":[],"lastnames":["Li"],"firstnames":["Y."],"suffixes":[]},{"propositions":[],"lastnames":["Salazar"],"firstnames":["G."],"suffixes":[]},{"propositions":[],"lastnames":["Henry"],"firstnames":["N."],"suffixes":[]},{"propositions":[],"lastnames":["Labadie"],"firstnames":["K."],"suffixes":[]},{"propositions":["de"],"lastnames":["Vargas"],"firstnames":["C."],"suffixes":[]},{"propositions":[],"lastnames":["Sullivan"],"firstnames":["M.","B."],"suffixes":[]},{"propositions":[],"lastnames":["Bowler"],"firstnames":["C."],"suffixes":[]},{"propositions":[],"lastnames":["Wincker"],"firstnames":["P."],"suffixes":[]},{"propositions":[],"lastnames":["Karp-Boss"],"firstnames":["L."],"suffixes":[]},{"propositions":[],"lastnames":["Sunagawa"],"firstnames":["S."],"suffixes":[]},{"propositions":[],"lastnames":["Ogata"],"firstnames":["H."],"suffixes":[]}],"title":"Biogeography of marine giant viruses reveals their interplay with eukaryotes and ecological functions","journal":"Nat Ecol Evol","volume":"4","number":"12","pages":"1639-1649","note":"Endo, Hisashi Blanc-Mathieu, Romain Li, Yanze Salazar, Guillem Henry, Nicolas Labadie, Karine de Vargas, Colomban Sullivan, Matthew B Bowler, Chris Wincker, Patrick Karp-Boss, Lee Sunagawa, Shinichi Ogata, Hiroyuki eng Research Support, Non-U.S. Gov't England Nat Ecol Evol. 2020 Dec;4(12):1639-1649. doi: 10.1038/s41559-020-01288-w. Epub 2020 Sep 7.","abstract":"Nucleocytoplasmic large DNA viruses (NCLDVs) are ubiquitous in marine environments and infect diverse eukaryotes. However, little is known about their biogeography and ecology in the ocean. By leveraging the Tara Oceans pole-to-pole metagenomic data set, we investigated the distribution of NCLDVs across size fractions, depths and biomes, as well as their associations with eukaryotic communities. Our analyses reveal a heterogeneous distribution of NCLDVs across oceans, and a higher proportion of unique NCLDVs in the polar biomes. The community structures of NCLDV families correlate with specific eukaryotic lineages, including many photosynthetic groups. NCLDV communities are generally distinct between surface and mesopelagic zones, but at some locations they exhibit a high similarity between the two depths. This vertical similarity correlates to surface phytoplankton biomass but not to physical mixing processes, which suggests a potential role of vertical transport in structuring mesopelagic NCLDV communities. These results underscore the importance of the interactions between NCLDVs and eukaryotes in biogeochemical processes in the ocean.","keywords":"DNA Viruses Eukaryota *Giant Viruses/genetics Humans Oceans and Seas Phylogeny","issn":"2397-334X (Electronic) 2397-334X (Linking)","doi":"10.1038/s41559-020-01288-w","url":"https://www.ncbi.nlm.nih.gov/pubmed/32895519","year":"2020","bibtex":"@article{RN181,\r\n author = {Endo, H. and Blanc-Mathieu, R. and Li, Y. and Salazar, G. and Henry, N. and Labadie, K. and de Vargas, C. and Sullivan, M. B. and Bowler, C. and Wincker, P. and Karp-Boss, L. and Sunagawa, S. and Ogata, H.},\r\n title = {Biogeography of marine giant viruses reveals their interplay with eukaryotes and ecological functions},\r\n journal = {Nat Ecol Evol},\r\n volume = {4},\r\n number = {12},\r\n pages = {1639-1649},\r\n note = {Endo, Hisashi\r\nBlanc-Mathieu, Romain\r\nLi, Yanze\r\nSalazar, Guillem\r\nHenry, Nicolas\r\nLabadie, Karine\r\nde Vargas, Colomban\r\nSullivan, Matthew B\r\nBowler, Chris\r\nWincker, Patrick\r\nKarp-Boss, Lee\r\nSunagawa, Shinichi\r\nOgata, Hiroyuki\r\neng\r\nResearch Support, Non-U.S. Gov't\r\nEngland\r\nNat Ecol Evol. 2020 Dec;4(12):1639-1649. doi: 10.1038/s41559-020-01288-w. Epub 2020 Sep 7.},\r\n abstract = {Nucleocytoplasmic large DNA viruses (NCLDVs) are ubiquitous in marine environments and infect diverse eukaryotes. However, little is known about their biogeography and ecology in the ocean. By leveraging the Tara Oceans pole-to-pole metagenomic data set, we investigated the distribution of NCLDVs across size fractions, depths and biomes, as well as their associations with eukaryotic communities. Our analyses reveal a heterogeneous distribution of NCLDVs across oceans, and a higher proportion of unique NCLDVs in the polar biomes. The community structures of NCLDV families correlate with specific eukaryotic lineages, including many photosynthetic groups. NCLDV communities are generally distinct between surface and mesopelagic zones, but at some locations they exhibit a high similarity between the two depths. This vertical similarity correlates to surface phytoplankton biomass but not to physical mixing processes, which suggests a potential role of vertical transport in structuring mesopelagic NCLDV communities. 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