A dual program for translation regulation in cellular proliferation and differentiation. Gingold, H., Tehler, D., Christoffersen, N. R, Nielsen, M. M, Asmar, F., Kooistra, S. M, Christophersen, N. S, Christensen, L. L., Borre, M., S\orensen, K. D, Andersen, L. D, Andersen, C. L, Hulleman, E., Wurdinger, T., Ralfki\aer, E., Helin, K., Gr\onb\aek, K., Orntoft, T., Waszak, S. M, Dahan, O., Pedersen, J. S., Lund, A. H, & Pilpel, Y. Cell, 158(6):1281--1292, 11~September, 2014. doi abstract bibtex A dichotomous choice for metazoan cells is between proliferation and differentiation. Measuring tRNA pools in various cell types, we found two distinct subsets, one that is induced in proliferating cells, and repressed otherwise, and another with the opposite signature. Correspondingly, we found that genes serving cell-autonomous functions and genes involved in multicellularity obey distinct codon usage. Proliferation-induced and differentiation-induced tRNAs often carry anticodons that correspond to the codons enriched among the cell-autonomous and the multicellularity genes, respectively. Because mRNAs of cell-autonomous genes are induced in proliferation and cancer in particular, the concomitant induction of their codon-enriched tRNAs suggests coordination between transcription and translation. Histone modifications indeed change similarly in the vicinity of cell-autonomous genes and their corresponding tRNAs, and in multicellularity genes and their tRNAs, suggesting the existence of transcriptional programs coordinating tRNA supply and demand. Hence, we describe the existence of two distinct translation programs that operate during proliferation and differentiation.
@ARTICLE{Gingold2014-ns,
title = "A dual program for translation regulation in cellular
proliferation and differentiation",
author = "Gingold, Hila and Tehler, Disa and Christoffersen, Nanna R and
Nielsen, Morten M and Asmar, Fazila and Kooistra, Susanne M and
Christophersen, Nicolaj S and Christensen, Lise Lotte and Borre,
Michael and S\o{}rensen, Karina D and Andersen, Lars D and
Andersen, Claus L and Hulleman, Esther and Wurdinger, Tom and
Ralfki\ae{}r, Elisabeth and Helin, Kristian and Gr\o{}nb\ae{}k,
Kirsten and Orntoft, Torben and Waszak, Sebastian M and Dahan,
Orna and Pedersen, Jakob Skou and Lund, Anders H and Pilpel,
Yitzhak",
abstract = "A dichotomous choice for metazoan cells is between proliferation
and differentiation. Measuring tRNA pools in various cell types,
we found two distinct subsets, one that is induced in
proliferating cells, and repressed otherwise, and another with
the opposite signature. Correspondingly, we found that genes
serving cell-autonomous functions and genes involved in
multicellularity obey distinct codon usage. Proliferation-induced
and differentiation-induced tRNAs often carry anticodons that
correspond to the codons enriched among the cell-autonomous and
the multicellularity genes, respectively. Because mRNAs of
cell-autonomous genes are induced in proliferation and cancer in
particular, the concomitant induction of their codon-enriched
tRNAs suggests coordination between transcription and
translation. Histone modifications indeed change similarly in the
vicinity of cell-autonomous genes and their corresponding tRNAs,
and in multicellularity genes and their tRNAs, suggesting the
existence of transcriptional programs coordinating tRNA supply
and demand. Hence, we describe the existence of two distinct
translation programs that operate during proliferation and
differentiation.",
journal = "Cell",
volume = 158,
number = 6,
pages = "1281--1292",
month = "11~" # sep,
year = 2014,
keywords = "
cancer;codon;genereg;transcription;translation;trna;zotero;trends;Zotero
Import (Aug 30);Zotero Import (Aug 30)/My Library;Zotero Import
(Aug 30)/My Library/genereg;Trends",
language = "eng",
issn = "0092-8674, 1097-4172",
pmid = "25215487",
doi = "10.1016/j.cell.2014.08.011"
}
Downloads: 0
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H","Pilpel, Y."],"year":2014,"bibtype":"article","biburl":"https://sbamin.com/files/classics_in_biology.bib","bibdata":{"bibtype":"article","type":"article","title":"A dual program for translation regulation in cellular proliferation and differentiation","author":[{"propositions":[],"lastnames":["Gingold"],"firstnames":["Hila"],"suffixes":[]},{"propositions":[],"lastnames":["Tehler"],"firstnames":["Disa"],"suffixes":[]},{"propositions":[],"lastnames":["Christoffersen"],"firstnames":["Nanna","R"],"suffixes":[]},{"propositions":[],"lastnames":["Nielsen"],"firstnames":["Morten","M"],"suffixes":[]},{"propositions":[],"lastnames":["Asmar"],"firstnames":["Fazila"],"suffixes":[]},{"propositions":[],"lastnames":["Kooistra"],"firstnames":["Susanne","M"],"suffixes":[]},{"propositions":[],"lastnames":["Christophersen"],"firstnames":["Nicolaj","S"],"suffixes":[]},{"propositions":[],"lastnames":["Christensen"],"firstnames":["Lise","Lotte"],"suffixes":[]},{"propositions":[],"lastnames":["Borre"],"firstnames":["Michael"],"suffixes":[]},{"propositions":[],"lastnames":["S\\orensen"],"firstnames":["Karina","D"],"suffixes":[]},{"propositions":[],"lastnames":["Andersen"],"firstnames":["Lars","D"],"suffixes":[]},{"propositions":[],"lastnames":["Andersen"],"firstnames":["Claus","L"],"suffixes":[]},{"propositions":[],"lastnames":["Hulleman"],"firstnames":["Esther"],"suffixes":[]},{"propositions":[],"lastnames":["Wurdinger"],"firstnames":["Tom"],"suffixes":[]},{"propositions":[],"lastnames":["Ralfki\\aer"],"firstnames":["Elisabeth"],"suffixes":[]},{"propositions":[],"lastnames":["Helin"],"firstnames":["Kristian"],"suffixes":[]},{"propositions":[],"lastnames":["Gr\\onb\\aek"],"firstnames":["Kirsten"],"suffixes":[]},{"propositions":[],"lastnames":["Orntoft"],"firstnames":["Torben"],"suffixes":[]},{"propositions":[],"lastnames":["Waszak"],"firstnames":["Sebastian","M"],"suffixes":[]},{"propositions":[],"lastnames":["Dahan"],"firstnames":["Orna"],"suffixes":[]},{"propositions":[],"lastnames":["Pedersen"],"firstnames":["Jakob","Skou"],"suffixes":[]},{"propositions":[],"lastnames":["Lund"],"firstnames":["Anders","H"],"suffixes":[]},{"propositions":[],"lastnames":["Pilpel"],"firstnames":["Yitzhak"],"suffixes":[]}],"abstract":"A dichotomous choice for metazoan cells is between proliferation and differentiation. Measuring tRNA pools in various cell types, we found two distinct subsets, one that is induced in proliferating cells, and repressed otherwise, and another with the opposite signature. Correspondingly, we found that genes serving cell-autonomous functions and genes involved in multicellularity obey distinct codon usage. Proliferation-induced and differentiation-induced tRNAs often carry anticodons that correspond to the codons enriched among the cell-autonomous and the multicellularity genes, respectively. Because mRNAs of cell-autonomous genes are induced in proliferation and cancer in particular, the concomitant induction of their codon-enriched tRNAs suggests coordination between transcription and translation. Histone modifications indeed change similarly in the vicinity of cell-autonomous genes and their corresponding tRNAs, and in multicellularity genes and their tRNAs, suggesting the existence of transcriptional programs coordinating tRNA supply and demand. Hence, we describe the existence of two distinct translation programs that operate during proliferation and differentiation.","journal":"Cell","volume":"158","number":"6","pages":"1281--1292","month":"11~September","year":"2014","keywords":"cancer;codon;genereg;transcription;translation;trna;zotero;trends;Zotero Import (Aug 30);Zotero Import (Aug 30)/My Library;Zotero Import (Aug 30)/My Library/genereg;Trends","language":"eng","issn":"0092-8674, 1097-4172","pmid":"25215487","doi":"10.1016/j.cell.2014.08.011","bibtex":"@ARTICLE{Gingold2014-ns,\n title = \"A dual program for translation regulation in cellular\n proliferation and differentiation\",\n author = \"Gingold, Hila and Tehler, Disa and Christoffersen, Nanna R and\n Nielsen, Morten M and Asmar, Fazila and Kooistra, Susanne M and\n Christophersen, Nicolaj S and Christensen, Lise Lotte and Borre,\n Michael and S\\o{}rensen, Karina D and Andersen, Lars D and\n Andersen, Claus L and Hulleman, Esther and Wurdinger, Tom and\n Ralfki\\ae{}r, Elisabeth and Helin, Kristian and Gr\\o{}nb\\ae{}k,\n Kirsten and Orntoft, Torben and Waszak, Sebastian M and Dahan,\n Orna and Pedersen, Jakob Skou and Lund, Anders H and Pilpel,\n Yitzhak\",\n abstract = \"A dichotomous choice for metazoan cells is between proliferation\n and differentiation. Measuring tRNA pools in various cell types,\n we found two distinct subsets, one that is induced in\n proliferating cells, and repressed otherwise, and another with\n the opposite signature. Correspondingly, we found that genes\n serving cell-autonomous functions and genes involved in\n multicellularity obey distinct codon usage. Proliferation-induced\n and differentiation-induced tRNAs often carry anticodons that\n correspond to the codons enriched among the cell-autonomous and\n the multicellularity genes, respectively. Because mRNAs of\n cell-autonomous genes are induced in proliferation and cancer in\n particular, the concomitant induction of their codon-enriched\n tRNAs suggests coordination between transcription and\n translation. Histone modifications indeed change similarly in the\n vicinity of cell-autonomous genes and their corresponding tRNAs,\n and in multicellularity genes and their tRNAs, suggesting the\n existence of transcriptional programs coordinating tRNA supply\n and demand. Hence, we describe the existence of two distinct\n translation programs that operate during proliferation and\n differentiation.\",\n journal = \"Cell\",\n volume = 158,\n number = 6,\n pages = \"1281--1292\",\n month = \"11~\" # sep,\n year = 2014,\n keywords = \"\n cancer;codon;genereg;transcription;translation;trna;zotero;trends;Zotero\n Import (Aug 30);Zotero Import (Aug 30)/My Library;Zotero Import\n (Aug 30)/My Library/genereg;Trends\",\n language = \"eng\",\n issn = \"0092-8674, 1097-4172\",\n pmid = \"25215487\",\n doi = \"10.1016/j.cell.2014.08.011\"\n}\n\n","author_short":["Gingold, H.","Tehler, D.","Christoffersen, N. R","Nielsen, M. M","Asmar, F.","Kooistra, S. M","Christophersen, N. S","Christensen, L. 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