The brain imaging data structure, a format for organizing and describing outputs of neuroimaging experiments. Gorgolewski, K. J., Auer, T., Calhoun, V. D., Craddock, R. C., Das, S., Duff, E. P., Flandin, G., Ghosh, S. S., Glatard, T., Halchenko, Y. O., Handwerker, D. A., Hanke, M., Keator, D., Li, X., Michael, Z., Maumet, C., Nichols, B. N., Nichols, T. E., Pellman, J., Poline, J., Rokem, A., Schaefer, G., Sochat, V., Triplett, W., Turner, J. A., Varoquaux, G., & Poldrack, R. A. Scientific Data, 3(1):160044, June, 2016. Number: 1 Publisher: Nature Publishing Group![The brain imaging data structure, a format for organizing and describing outputs of neuroimaging experiments [link]](https://bibbase.org/img/filetypes/link.svg "link")
Paper doi abstract bibtex The development of magnetic resonance imaging (MRI) techniques has defined modern neuroimaging. Since its inception, tens of thousands of studies using techniques such as functional MRI and diffusion weighted imaging have allowed for the non-invasive study of the brain. Despite the fact that MRI is routinely used to obtain data for neuroscience research, there has been no widely adopted standard for organizing and describing the data collected in an imaging experiment. This renders sharing and reusing data (within or between labs) difficult if not impossible and unnecessarily complicates the application of automatic pipelines and quality assurance protocols. To solve this problem, we have developed the Brain Imaging Data Structure (BIDS), a standard for organizing and describing MRI datasets. The BIDS standard uses file formats compatible with existing software, unifies the majority of practices already common in the field, and captures the metadata necessary for most common data processing operations.
@article{gorgolewski_brain_2016,
title = {The brain imaging data structure, a format for organizing and describing outputs of neuroimaging experiments},
volume = {3},
copyright = {2016 The Author(s)},
issn = {2052-4463},
url = {https://www.nature.com/articles/sdata201644},
doi = {10.1038/sdata.2016.44},
abstract = {The development of magnetic resonance imaging (MRI) techniques has defined modern neuroimaging. Since its inception, tens of thousands of studies using techniques such as functional MRI and diffusion weighted imaging have allowed for the non-invasive study of the brain. Despite the fact that MRI is routinely used to obtain data for neuroscience research, there has been no widely adopted standard for organizing and describing the data collected in an imaging experiment. This renders sharing and reusing data (within or between labs) difficult if not impossible and unnecessarily complicates the application of automatic pipelines and quality assurance protocols. To solve this problem, we have developed the Brain Imaging Data Structure (BIDS), a standard for organizing and describing MRI datasets. The BIDS standard uses file formats compatible with existing software, unifies the majority of practices already common in the field, and captures the metadata necessary for most common data processing operations.},
language = {en},
number = {1},
urldate = {2023-03-13},
journal = {Scientific Data},
author = {Gorgolewski, Krzysztof J. and Auer, Tibor and Calhoun, Vince D. and Craddock, R. Cameron and Das, Samir and Duff, Eugene P. and Flandin, Guillaume and Ghosh, Satrajit S. and Glatard, Tristan and Halchenko, Yaroslav O. and Handwerker, Daniel A. and Hanke, Michael and Keator, David and Li, Xiangrui and Michael, Zachary and Maumet, Camille and Nichols, B. Nolan and Nichols, Thomas E. and Pellman, John and Poline, Jean-Baptiste and Rokem, Ariel and Schaefer, Gunnar and Sochat, Vanessa and Triplett, William and Turner, Jessica A. and Varoquaux, Gaël and Poldrack, Russell A.},
month = jun,
year = {2016},
note = {Number: 1
Publisher: Nature Publishing Group},
keywords = {Data publication and archiving, Research data},
pages = {160044},
file = {Full Text PDF:/home/tchaase/snap/zotero-snap/common/Zotero/storage/4JKKPMIL/Gorgolewski et al. - 2016 - The brain imaging data structure, a format for org.pdf:application/pdf},
}
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