Low genetic diversity and population connectivity fuel vulnerability to climate change for the Tertiary relict pine Pinus bungeana. Guo, J., Wang, B., Liu, Z., Mao, J., Wang, X., & Zhao, W. Journal of Systematics and Evolution, 61(1):143–156, December, 2021. _eprint: https://onlinelibrary.wiley.com/doi/pdf/10.1111/jse.12821![Low genetic diversity and population connectivity fuel vulnerability to climate change for the Tertiary relict pine Pinus bungeana [link]](https://bibbase.org/img/filetypes/link.svg "link")
Paper doi abstract bibtex Endemic species are important components of regional biodiversity and hold the key to understanding local adaptation and evolutionary processes that shape species distributions. This study investigated the biogeographic history of a relict conifer Pinus bungeana Zucc. ex Endl. confined to central China. We examined genetic diversity in P. bungeana using genotyping-by-sequencing and chloroplast and mitochondrial DNA markers. We performed spatial and temporal inference of recent genetic and demographic changes, and dissected the impacts of geography and environmental gradients on population differentiation. We then projected P. bungeana's risk of decline under future climates. We found extremely low nucleotide diversity (average π 0.0014), and strong population structure (global FST 0.234) even at regional scales, reflecting long-term isolation in small populations. The species experienced severe bottlenecks in the early Pliocene and continued to decline in the Pleistocene in the western distribution, whereas the east expanded recently. Local adaptation played a small (8%) but significant role in population diversity. Low genetic diversity in fragmented populations makes the species highly vulnerable to climate change, particularly in marginal and relict populations. We suggest that conservation efforts should focus on enhancing gene pool and population growth through assisted migration within each genetic cluster to reduce the risk of further genetic drift and extinction.
@article{guo_low_2021,
title = {Low genetic diversity and population connectivity fuel vulnerability to climate change for the {Tertiary} relict pine {Pinus} bungeana},
volume = {61},
issn = {1759-6831},
url = {https://onlinelibrary.wiley.com/doi/abs/10.1111/jse.12821},
doi = {10.1111/jse.12821},
abstract = {Endemic species are important components of regional biodiversity and hold the key to understanding local adaptation and evolutionary processes that shape species distributions. This study investigated the biogeographic history of a relict conifer Pinus bungeana Zucc. ex Endl. confined to central China. We examined genetic diversity in P. bungeana using genotyping-by-sequencing and chloroplast and mitochondrial DNA markers. We performed spatial and temporal inference of recent genetic and demographic changes, and dissected the impacts of geography and environmental gradients on population differentiation. We then projected P. bungeana's risk of decline under future climates. We found extremely low nucleotide diversity (average π 0.0014), and strong population structure (global FST 0.234) even at regional scales, reflecting long-term isolation in small populations. The species experienced severe bottlenecks in the early Pliocene and continued to decline in the Pleistocene in the western distribution, whereas the east expanded recently. Local adaptation played a small (8\%) but significant role in population diversity. Low genetic diversity in fragmented populations makes the species highly vulnerable to climate change, particularly in marginal and relict populations. We suggest that conservation efforts should focus on enhancing gene pool and population growth through assisted migration within each genetic cluster to reduce the risk of further genetic drift and extinction.},
language = {en},
number = {1},
urldate = {2023-04-27},
journal = {Journal of Systematics and Evolution},
author = {Guo, Jing-Fang and Wang, Baosheng and Liu, Zhan-Lin and Mao, Jian-Feng and Wang, Xiao-Ru and Zhao, Wei},
month = dec,
year = {2021},
note = {\_eprint: https://onlinelibrary.wiley.com/doi/pdf/10.1111/jse.12821},
keywords = {Pinus bungeana, climate relict, genetic diversity, genomic offset, migration barrier, population bottleneck},
pages = {143--156},
}
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We examined genetic diversity in P. bungeana using genotyping-by-sequencing and chloroplast and mitochondrial DNA markers. We performed spatial and temporal inference of recent genetic and demographic changes, and dissected the impacts of geography and environmental gradients on population differentiation. We then projected P. bungeana's risk of decline under future climates. We found extremely low nucleotide diversity (average π 0.0014), and strong population structure (global FST 0.234) even at regional scales, reflecting long-term isolation in small populations. The species experienced severe bottlenecks in the early Pliocene and continued to decline in the Pleistocene in the western distribution, whereas the east expanded recently. Local adaptation played a small (8%) but significant role in population diversity. Low genetic diversity in fragmented populations makes the species highly vulnerable to climate change, particularly in marginal and relict populations. We suggest that conservation efforts should focus on enhancing gene pool and population growth through assisted migration within each genetic cluster to reduce the risk of further genetic drift and extinction.","language":"en","number":"1","urldate":"2023-04-27","journal":"Journal of Systematics and Evolution","author":[{"propositions":[],"lastnames":["Guo"],"firstnames":["Jing-Fang"],"suffixes":[]},{"propositions":[],"lastnames":["Wang"],"firstnames":["Baosheng"],"suffixes":[]},{"propositions":[],"lastnames":["Liu"],"firstnames":["Zhan-Lin"],"suffixes":[]},{"propositions":[],"lastnames":["Mao"],"firstnames":["Jian-Feng"],"suffixes":[]},{"propositions":[],"lastnames":["Wang"],"firstnames":["Xiao-Ru"],"suffixes":[]},{"propositions":[],"lastnames":["Zhao"],"firstnames":["Wei"],"suffixes":[]}],"month":"December","year":"2021","note":"_eprint: https://onlinelibrary.wiley.com/doi/pdf/10.1111/jse.12821","keywords":"Pinus bungeana, climate relict, genetic diversity, genomic offset, migration barrier, population bottleneck","pages":"143–156","bibtex":"@article{guo_low_2021,\n\ttitle = {Low genetic diversity and population connectivity fuel vulnerability to climate change for the {Tertiary} relict pine {Pinus} bungeana},\n\tvolume = {61},\n\tissn = {1759-6831},\n\turl = {https://onlinelibrary.wiley.com/doi/abs/10.1111/jse.12821},\n\tdoi = {10.1111/jse.12821},\n\tabstract = {Endemic species are important components of regional biodiversity and hold the key to understanding local adaptation and evolutionary processes that shape species distributions. This study investigated the biogeographic history of a relict conifer Pinus bungeana Zucc. ex Endl. confined to central China. We examined genetic diversity in P. bungeana using genotyping-by-sequencing and chloroplast and mitochondrial DNA markers. We performed spatial and temporal inference of recent genetic and demographic changes, and dissected the impacts of geography and environmental gradients on population differentiation. We then projected P. bungeana's risk of decline under future climates. We found extremely low nucleotide diversity (average π 0.0014), and strong population structure (global FST 0.234) even at regional scales, reflecting long-term isolation in small populations. The species experienced severe bottlenecks in the early Pliocene and continued to decline in the Pleistocene in the western distribution, whereas the east expanded recently. Local adaptation played a small (8\\%) but significant role in population diversity. 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