The GUDMAP database–an online resource for genitourinary research. Harding, S., Armit, C, Armstrong, J, Brennan, J, Cheng, Y, Haggarty, B, Houghton, D, Lloyd-MacGilp, S, Pi, X, Roochun, Y, Sharghi, M, Tindal, C, McMahon, A., Gottesman, B, Little, M., Georgas, K, Aronow, B, Potter, S., Brunskill, E., Southard-Smith, E., Mendelsohn, C, Baldock, R., Davies, J., & Davidson, D Development, 138(13):2845–53, July, 2011. doi abstract bibtex The GenitoUrinary Development Molecular Anatomy Project (GUDMAP) is an international consortium working to generate gene expression data and transgenic mice. GUDMAP includes data from large-scale in situ hybridisation screens (wholemount and section) and microarray gene expression data of microdissected, laser-captured and FACS-sorted components of the developing mouse genitourinary (GU) system. These expression data are annotated using a high-resolution anatomy ontology specific to the developing murine GU system. GUDMAP data are freely accessible at www.gudmap.org via easy-to-use interfaces. This curated, high-resolution dataset serves as a powerful resource for biologists, clinicians and bioinformaticians interested in the developing urogenital system. This paper gives examples of how the data have been used to address problems in developmental biology and provides a primer for those wishing to use the database in their own research.
@article{harding_gudmap_2011,
title = {The {GUDMAP} database--an online resource for genitourinary research},
volume = {138},
doi = {10.1242/dev.063594},
abstract = {The GenitoUrinary Development Molecular Anatomy Project (GUDMAP) is an international consortium working to generate gene expression data and transgenic mice. GUDMAP includes data from large-scale in situ hybridisation screens (wholemount and section) and microarray gene expression data of microdissected, laser-captured and FACS-sorted components of the developing mouse genitourinary (GU) system. These expression data are annotated using a high-resolution anatomy ontology specific to the developing murine GU system. GUDMAP data are freely accessible at www.gudmap.org via easy-to-use interfaces. This curated, high-resolution dataset serves as a powerful resource for biologists, clinicians and bioinformaticians interested in the developing urogenital system. This paper gives examples of how the data have been used to address problems in developmental biology and provides a primer for those wishing to use the database in their own research.},
number = {13},
journal = {Development},
author = {Harding, SD and Armit, C and Armstrong, J and Brennan, J and Cheng, Y and Haggarty, B and Houghton, D and Lloyd-MacGilp, S and Pi, X and Roochun, Y and Sharghi, M and Tindal, C and McMahon, AP and Gottesman, B and Little, MH and Georgas, K and Aronow, B and Potter, SS and Brunskill, EW and Southard-Smith, EM and Mendelsohn, C and Baldock, RA and Davies, JA and Davidson, D},
month = jul,
year = {2011},
pages = {2845--53},
}
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