GOstruct 2.0: Automated Protein Function Prediction for Annotated Proteins. Kahanda, I. & Ben-Hur, A. In Proceedings of the 8th ACM International Conference on Bioinformatics, Computational Biology,and Health Informatics, of ACM-BCB '17, pages 60–66, New York, NY, USA, 2017. ACM.
GOstruct 2.0: Automated Protein Function Prediction for Annotated Proteins [link]Paper  doi  bibtex   
@InProceedings{Kahanda:2017:GAP:3107411.3107417,
  author    = {Kahanda, Indika and Ben-Hur, Asa},
  title     = {GOstruct 2.0: Automated Protein Function Prediction for Annotated Proteins},
  booktitle = {Proceedings of the 8th ACM International Conference on Bioinformatics, Computational Biology,and Health Informatics},
  year      = {2017},
  series    = {ACM-BCB '17},
  publisher = {ACM},
  location  = {Boston, Massachusetts, USA},
  isbn      = {978-1-4503-4722-8},
  pages     = {60--66},
  doi       = {10.1145/3107411.3107417},
  url       = {http://doi.acm.org/10.1145/3107411.3107417},
  acmid     = {3107417},
  address   = {New York, NY, USA},
  keywords  = {automated protein function prediction, hierarchical multilabel classification, incomplete labels, structured support vector machines},
  numpages  = {7},
}

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