You Should Use Regression to Detect Cells. Kainz, P., Urschler, M., Schulter, S., Wohlhart, P., & Lepetit, V. Volume 9351, Navab, N., Hornegger, J., Wells, W., & Frangi, A., F., editors. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), pages 276-283. 2015.
Website doi abstract bibtex Automated cell detection in histopathology images is a hard problem due to the large variance of cell shape and appearance. We show that cells can be detected reliably in images by predicting, for each pixel location, a monotonous function of the distance to the center of the closest cell. Cell centers can then be identified by extracting local extremums of the predicted values. This approach results in a very simple method, which is easy to implement. We show on two challenging microscopy image datasets that our approach outperforms state-of-the-art methods in terms of accuracy, reliability, and speed. We also introduce a new dataset that we will make publicly available.
@inbook{
type = {inbook},
year = {2015},
pages = {276-283},
volume = {9351},
websites = {http://link.springer.com/10.1007/978-3-319-24574-4_33},
id = {7a8627ff-0d32-3615-b314-58c075620f92},
created = {2016-05-05T11:33:36.000Z},
file_attached = {false},
profile_id = {53d1e3c7-2f16-3c81-9a84-dccd45be4841},
last_modified = {2019-11-08T01:40:03.067Z},
read = {false},
starred = {false},
authored = {true},
confirmed = {true},
hidden = {false},
citation_key = {Kainz2015},
notes = {Poster},
folder_uuids = {0ec41d70-75f1-4a99-820b-0a83ccc37f54},
private_publication = {false},
abstract = {Automated cell detection in histopathology images is a hard problem due to the large variance of cell shape and appearance. We show that cells can be detected reliably in images by predicting, for each pixel location, a monotonous function of the distance to the center of the closest cell. Cell centers can then be identified by extracting local extremums of the predicted values. This approach results in a very simple method, which is easy to implement. We show on two challenging microscopy image datasets that our approach outperforms state-of-the-art methods in terms of accuracy, reliability, and speed. We also introduce a new dataset that we will make publicly available.},
bibtype = {inbook},
author = {Kainz, Philipp and Urschler, Martin and Schulter, Samuel and Wohlhart, Paul and Lepetit, Vincent},
editor = {Navab, N. and Hornegger, J. and Wells, W. and Frangi, A. F.},
doi = {10.1007/978-3-319-24574-4_33},
chapter = {You Should Use Regression to Detect Cells},
title = {Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)}
}
Downloads: 0
{"_id":"wHXdvSRRodyCpQ92K","bibbaseid":"kainz-urschler-schulter-wohlhart-lepetit-lecturenotesincomputerscienceincludingsubserieslecturenotesinartificialintelligenceandlecturenotesinbioinformatics-2015","authorIDs":["7Kn6pNXYAbwfP2qf9","vQb2TpF7F83goeATt"],"author_short":["Kainz, P.","Urschler, M.","Schulter, S.","Wohlhart, P.","Lepetit, V."],"bibdata":{"type":"inbook","year":"2015","pages":"276-283","volume":"9351","websites":"http://link.springer.com/10.1007/978-3-319-24574-4_33","id":"7a8627ff-0d32-3615-b314-58c075620f92","created":"2016-05-05T11:33:36.000Z","file_attached":false,"profile_id":"53d1e3c7-2f16-3c81-9a84-dccd45be4841","last_modified":"2019-11-08T01:40:03.067Z","read":false,"starred":false,"authored":"true","confirmed":"true","hidden":false,"citation_key":"Kainz2015","notes":"Poster","folder_uuids":"0ec41d70-75f1-4a99-820b-0a83ccc37f54","private_publication":false,"abstract":"Automated cell detection in histopathology images is a hard problem due to the large variance of cell shape and appearance. We show that cells can be detected reliably in images by predicting, for each pixel location, a monotonous function of the distance to the center of the closest cell. Cell centers can then be identified by extracting local extremums of the predicted values. This approach results in a very simple method, which is easy to implement. We show on two challenging microscopy image datasets that our approach outperforms state-of-the-art methods in terms of accuracy, reliability, and speed. We also introduce a new dataset that we will make publicly available.","bibtype":"inbook","author":"Kainz, Philipp and Urschler, Martin and Schulter, Samuel and Wohlhart, Paul and Lepetit, Vincent","editor":"Navab, N. and Hornegger, J. and Wells, W. and Frangi, A. F.","doi":"10.1007/978-3-319-24574-4_33","chapter":"You Should Use Regression to Detect Cells","title":"Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)","bibtex":"@inbook{\n type = {inbook},\n year = {2015},\n pages = {276-283},\n volume = {9351},\n websites = {http://link.springer.com/10.1007/978-3-319-24574-4_33},\n id = {7a8627ff-0d32-3615-b314-58c075620f92},\n created = {2016-05-05T11:33:36.000Z},\n file_attached = {false},\n profile_id = {53d1e3c7-2f16-3c81-9a84-dccd45be4841},\n last_modified = {2019-11-08T01:40:03.067Z},\n read = {false},\n starred = {false},\n authored = {true},\n confirmed = {true},\n hidden = {false},\n citation_key = {Kainz2015},\n notes = {Poster},\n folder_uuids = {0ec41d70-75f1-4a99-820b-0a83ccc37f54},\n private_publication = {false},\n abstract = {Automated cell detection in histopathology images is a hard problem due to the large variance of cell shape and appearance. We show that cells can be detected reliably in images by predicting, for each pixel location, a monotonous function of the distance to the center of the closest cell. Cell centers can then be identified by extracting local extremums of the predicted values. This approach results in a very simple method, which is easy to implement. We show on two challenging microscopy image datasets that our approach outperforms state-of-the-art methods in terms of accuracy, reliability, and speed. We also introduce a new dataset that we will make publicly available.},\n bibtype = {inbook},\n author = {Kainz, Philipp and Urschler, Martin and Schulter, Samuel and Wohlhart, Paul and Lepetit, Vincent},\n editor = {Navab, N. and Hornegger, J. and Wells, W. and Frangi, A. F.},\n doi = {10.1007/978-3-319-24574-4_33},\n chapter = {You Should Use Regression to Detect Cells},\n title = {Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)}\n}","author_short":["Kainz, P.","Urschler, M.","Schulter, S.","Wohlhart, P.","Lepetit, V."],"editor_short":["Navab, N.","Hornegger, J.","Wells, W.","Frangi, A., F."],"urls":{"Website":"http://link.springer.com/10.1007/978-3-319-24574-4_33"},"biburl":"https://bibbase.org/service/mendeley/53d1e3c7-2f16-3c81-9a84-dccd45be4841","bibbaseid":"kainz-urschler-schulter-wohlhart-lepetit-lecturenotesincomputerscienceincludingsubserieslecturenotesinartificialintelligenceandlecturenotesinbioinformatics-2015","role":"author","metadata":{"authorlinks":{"urschler, m":"https://martinurschler.blogs.auckland.ac.nz/publications/"}},"downloads":0},"bibtype":"inbook","creationDate":"2020-07-27T21:18:14.288Z","downloads":0,"keywords":[],"search_terms":["lecture","notes","computer","science","including","subseries","lecture","notes","artificial","intelligence","lecture","notes","bioinformatics","kainz","urschler","schulter","wohlhart","lepetit"],"title":"Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)","year":2015,"biburl":"https://bibbase.org/service/mendeley/53d1e3c7-2f16-3c81-9a84-dccd45be4841","dataSources":["6jn29mijTw27iZTdN","ya2CyA73rpZseyrZ8","2252seNhipfTmjEBQ"]}