MAP-RSeq: Mayo Analysis Pipeline for RNA sequencing. Kocher, J. A, Asmann, Y. W, Thompson, A. E, Sicotte, H., Middha, S., Doughty, J. B, Baheti, S., Tang, X., Nie, J., Bockol, M. A, & others 2014.
bibtex   
@article{kocher2014map,
  title={MAP-RSeq: Mayo Analysis Pipeline for RNA sequencing},
  author={Kocher, Jean-Pierre A and Asmann, Yan W and Thompson, Aubrey E and Sicotte, Hugues and Middha, Sumit and Doughty, Jay B and Baheti, Saurabh and Tang, Xiaojia and Nie, Jinfu and Bockol, Matthew A and others},
  year={2014}
}

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