Integrated Annotation for Biomedical Information Extraction. Kulick, S.; Bies, A.; Liberman, M.; Mandel, M.; Mcdonald, R.; Palmer, M.; Schein, A.; Ungar, L.; Winters, S.; and White, P. Production, 2004.
abstract   bibtex   
We describe an approach to two areas of biomedical information extraction, drug devel- opment and cancer genomics. We have devel- oped a framework which includes corpus anno- tation integrated at multiple levels: a Treebank containing syntactic structure, a Propbank con- taining predicate-argument structure, and an- notation of entities and relations among the en- tities. Crucial to this approach is the proper characterization of entities as relation compo- nents, which allows the integration of the entity annotation with the syntactic structure while retaining the capacity to annotate and extract more complex events. We are training statis- tical taggers using this annotation for such ex- traction as well as using them for improving the annotation process.
@article{
 title = {Integrated Annotation for Biomedical Information Extraction},
 type = {article},
 year = {2004},
 pages = {61-68},
 id = {fee7a9ce-ea90-31f4-9ef2-22a9cf9838e5},
 created = {2011-12-29T19:53:53.000Z},
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 last_modified = {2017-03-14T14:36:19.698Z},
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 abstract = {We describe an approach to two areas of biomedical information extraction, drug devel- opment and cancer genomics. We have devel- oped a framework which includes corpus anno- tation integrated at multiple levels: a Treebank containing syntactic structure, a Propbank con- taining predicate-argument structure, and an- notation of entities and relations among the en- tities. Crucial to this approach is the proper characterization of entities as relation compo- nents, which allows the integration of the entity annotation with the syntactic structure while retaining the capacity to annotate and extract more complex events. We are training statis- tical taggers using this annotation for such ex- traction as well as using them for improving the annotation process.},
 bibtype = {article},
 author = {Kulick, Seth and Bies, Ann and Liberman, Mark and Mandel, Mark and Mcdonald, Ryan and Palmer, Martha and Schein, Andrew and Ungar, Lyle and Winters, Scott and White, Pete},
 journal = {Production}
}
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