How to Do the Deconstruction of Bioimage Analysis Workflows: A Case Study with SurfCut. Louveaux, M. & Verger, S. In Miura, K. & Sladoje, N., editors, Bioimage Data Analysis Workflows ‒ Advanced Components and Methods, pages 115–146. Springer International Publishing, Cham, 2022.
How to Do the Deconstruction of Bioimage Analysis Workflows: A Case Study with SurfCut [link]Paper  doi  abstract   bibtex   
Published bioimage analysis workflows are designed for a specific biology use case and often hidden in the material and methods section of a biology paper. The art of the bioimage analyst is to find these workflows, deconstruct them and tune them to a new use case by replacing or modifying components of the workflow and/or linking them to other workflows.
@incollection{louveaux_how_2022,
	address = {Cham},
	title = {How to {Do} the {Deconstruction} of {Bioimage} {Analysis} {Workflows}: {A} {Case} {Study} with {SurfCut}},
	isbn = {978-3-030-76394-7},
	shorttitle = {How to {Do} the {Deconstruction} of {Bioimage} {Analysis} {Workflows}},
	url = {https://doi.org/10.1007/978-3-030-76394-7_6},
	abstract = {Published bioimage analysis workflows are designed for a specific biology use case and often hidden in the material and methods section of a biology paper. The art of the bioimage analyst is to find these workflows, deconstruct them and tune them to a new use case by replacing or modifying components of the workflow and/or linking them to other workflows.},
	language = {en},
	urldate = {2024-10-09},
	booktitle = {Bioimage {Data} {Analysis} {Workflows} ‒ {Advanced} {Components} and {Methods}},
	publisher = {Springer International Publishing},
	author = {Louveaux, Marion and Verger, Stéphane},
	editor = {Miura, Kota and Sladoje, Nataša},
	year = {2022},
	doi = {10.1007/978-3-030-76394-7_6},
	pages = {115--146},
}

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