PASTA: ultra-large multiple sequence alignment for nucleotide and amino-acid sequences. Mirarab, S.; Nguyen, N.; Guo, S.; Wang, L.; Kim, J.; and Warnow, T. Journal of Computational Biology, 22(5):377–386, May, 2015.
PASTA: ultra-large multiple sequence alignment for nucleotide and amino-acid sequences [link]Paper  doi  bibtex   
@article{mirarab_pasta_2015,
	title = {{PASTA}: ultra-large multiple sequence alignment for nucleotide and amino-acid sequences},
	volume = {22},
	issn = {1066-5277, 1557-8666},
	shorttitle = {{PASTA}},
	url = {http://www.liebertpub.com/doi/10.1089/cmb.2014.0156},
	doi = {10.1089/cmb.2014.0156},
	language = {English},
	number = {5},
	urldate = {2020-04-07},
	journal = {Journal of Computational Biology},
	author = {Mirarab, Siavash and Nguyen, Nam and Guo, Sheng and Wang, Li-San and Kim, Junhyong and Warnow, Tandy},
	month = may,
	year = {2015},
	pages = {377--386},
}
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