FaceBase 3: analytical tools and FAIR resources for craniofacial and dental research. Samuels, B. D., Aho, R., Brinkley, J. F., Bugacov, A., Feingold, E., Fisher, S., Gonzalez-Reiche, A. S., Hacia, J. G., Hallgrimsson, B., Hansen, K., Harris, M. P., Ho, T., Holmes, G., Hooper, J. E., Jabs, E. W., Jones, K. L., Kesselman, C., Klein, O. D., Leslie, E. J., Li, H., Liao, E. C., Long, H., Lu, N., Maas, R. L., Marazita, M. L., Mohammed, J., Prescott, S., Schuler, R., Selleri, L., Spritz, R. A., Swigut, T., van Bakel, H., Visel, A., Welsh, I., Williams, C., Williams, T. J., Wysocka, J., Yuan, Y., & Chai, Y. Development, 147(18):dev191213, September, 2020. ![FaceBase 3: analytical tools and FAIR resources for craniofacial and dental research [link]](https://bibbase.org/img/filetypes/link.svg "link")
Paper doi abstract bibtex ABSTRACT The FaceBase Consortium was established by the National Institute of Dental and Craniofacial Research in 2009 as a ‘big data’ resource for the craniofacial research community. Over the past decade, researchers have deposited hundreds of annotated and curated datasets on both normal and disordered craniofacial development in FaceBase, all freely available to the research community on the FaceBase Hub website. The Hub has developed numerous visualization and analysis tools designed to promote integration of multidisciplinary data while remaining dedicated to the FAIR principles of data management (findability, accessibility, interoperability and reusability) and providing a faceted search infrastructure for locating desired data efficiently. Summaries of the datasets generated by the FaceBase projects from 2014 to 2019 are provided here. FaceBase 3 now welcomes contributions of data on craniofacial and dental development in humans, model organisms and cell lines. Collectively, the FaceBase Consortium, along with other NIH-supported data resources, provide a continuously growing, dynamic and current resource for the scientific community while improving data reproducibility and fulfilling data sharing requirements.
@article{samuels_facebase_2020,
title = {{FaceBase} 3: analytical tools and {FAIR} resources for craniofacial and dental research},
volume = {147},
issn = {1477-9129, 0950-1991},
shorttitle = {{FaceBase} 3},
url = {https://journals.biologists.com/dev/article/147/18/dev191213/225842/FaceBase-3-analytical-tools-and-FAIR-resources-for},
doi = {10.1242/dev.191213},
abstract = {ABSTRACT
The FaceBase Consortium was established by the National Institute of Dental and Craniofacial Research in 2009 as a ‘big data’ resource for the craniofacial research community. Over the past decade, researchers have deposited hundreds of annotated and curated datasets on both normal and disordered craniofacial development in FaceBase, all freely available to the research community on the FaceBase Hub website. The Hub has developed numerous visualization and analysis tools designed to promote integration of multidisciplinary data while remaining dedicated to the FAIR principles of data management (findability, accessibility, interoperability and reusability) and providing a faceted search infrastructure for locating desired data efficiently. Summaries of the datasets generated by the FaceBase projects from 2014 to 2019 are provided here. FaceBase 3 now welcomes contributions of data on craniofacial and dental development in humans, model organisms and cell lines. Collectively, the FaceBase Consortium, along with other NIH-supported data resources, provide a continuously growing, dynamic and current resource for the scientific community while improving data reproducibility and fulfilling data sharing requirements.},
language = {en},
number = {18},
urldate = {2022-01-14},
journal = {Development},
author = {Samuels, Bridget D. and Aho, Robert and Brinkley, James F. and Bugacov, Alejandro and Feingold, Eleanor and Fisher, Shannon and Gonzalez-Reiche, Ana S. and Hacia, Joseph G. and Hallgrimsson, Benedikt and Hansen, Karissa and Harris, Matthew P. and Ho, Thach-Vu and Holmes, Greg and Hooper, Joan E. and Jabs, Ethylin Wang and Jones, Kenneth L. and Kesselman, Carl and Klein, Ophir D. and Leslie, Elizabeth J. and Li, Hong and Liao, Eric C. and Long, Hannah and Lu, Na and Maas, Richard L. and Marazita, Mary L. and Mohammed, Jaaved and Prescott, Sara and Schuler, Robert and Selleri, Licia and Spritz, Richard A. and Swigut, Tomek and van Bakel, Harm and Visel, Axel and Welsh, Ian and Williams, Cristina and Williams, Trevor J. and Wysocka, Joanna and Yuan, Yuan and Chai, Yang},
month = sep,
year = {2020},
pages = {dev191213},
}
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