@article{RN92,
   author = {Seeleuthner, Y. and Mondy, S. and Lombard, V. and Carradec, Q. and Pelletier, E. and Wessner, M. and Leconte, J. and Mangot, J. F. and Poulain, J. and Labadie, K. and Logares, R. and Sunagawa, S. and de Berardinis, V. and Salanoubat, M. and Dimier, C. and Kandels-Lewis, S. and Picheral, M. and Searson, S. and Tara Oceans, Coordinators and Pesant, S. and Poulton, N. and Stepanauskas, R. and Bork, P. and Bowler, C. and Hingamp, P. and Sullivan, M. B. and Iudicone, D. and Massana, R. and Aury, J. M. and Henrissat, B. and Karsenti, E. and Jaillon, O. and Sieracki, M. and de Vargas, C. and Wincker, P.},
   title = {Single-cell genomics of multiple uncultured stramenopiles reveals underestimated functional diversity across oceans},
   journal = {Nat Commun},
   volume = {9},
   number = {1},
   pages = {310},
   note = {Seeleuthner, Yoann
Mondy, Samuel
Lombard, Vincent
Carradec, Quentin
Pelletier, Eric
Wessner, Marc
Leconte, Jade
Mangot, Jean-Francois
Poulain, Julie
Labadie, Karine
Logares, Ramiro
Sunagawa, Shinichi
de Berardinis, Veronique
Salanoubat, Marcel
Dimier, Celine
Kandels-Lewis, Stefanie
Picheral, Marc
Searson, Sarah
Pesant, Stephane
Poulton, Nicole
Stepanauskas, Ramunas
Bork, Peer
Bowler, Chris
Hingamp, Pascal
Sullivan, Matthew B
Iudicone, Daniele
Massana, Ramon
Aury, Jean-Marc
Henrissat, Bernard
Karsenti, Eric
Jaillon, Olivier
Sieracki, Mike
de Vargas, Colomban
Wincker, Patrick
eng
294823/European Research Council/International
Research Support, Non-U.S. Gov't
England
Nat Commun. 2018 Jan 22;9(1):310. doi: 10.1038/s41467-017-02235-3.},
   abstract = {Single-celled eukaryotes (protists) are critical players in global biogeochemical cycling of nutrients and energy in the oceans. While their roles as primary producers and grazers are well appreciated, other aspects of their life histories remain obscure due to challenges in culturing and sequencing their natural diversity. Here, we exploit single-cell genomics and metagenomics data from the circumglobal Tara Oceans expedition to analyze the genome content and apparent oceanic distribution of seven prevalent lineages of uncultured heterotrophic stramenopiles. Based on the available data, each sequenced genome or genotype appears to have a specific oceanic distribution, principally correlated with water temperature and depth. The genome content provides hypotheses for specialization in terms of cell motility, food spectra, and trophic stages, including the potential impact on their lifestyles of horizontal gene transfer from prokaryotes. Our results support the idea that prominent heterotrophic marine protists perform diverse functions in ocean ecology.},
   ISSN = {2041-1723 (Electronic)
2041-1723 (Linking)},
   DOI = {10.1038/s41467-017-02235-3},
   url = {https://www.ncbi.nlm.nih.gov/pubmed/29358710},
   year = {2018},
   type = {Journal Article}
}

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M.","Henrissat, B.","Karsenti, E.","Jaillon, O.","Sieracki, M.","de Vargas, C.","Wincker, P."],"bibdata":{"bibtype":"article","type":"Journal Article","author":[{"propositions":[],"lastnames":["Seeleuthner"],"firstnames":["Y."],"suffixes":[]},{"propositions":[],"lastnames":["Mondy"],"firstnames":["S."],"suffixes":[]},{"propositions":[],"lastnames":["Lombard"],"firstnames":["V."],"suffixes":[]},{"propositions":[],"lastnames":["Carradec"],"firstnames":["Q."],"suffixes":[]},{"propositions":[],"lastnames":["Pelletier"],"firstnames":["E."],"suffixes":[]},{"propositions":[],"lastnames":["Wessner"],"firstnames":["M."],"suffixes":[]},{"propositions":[],"lastnames":["Leconte"],"firstnames":["J."],"suffixes":[]},{"propositions":[],"lastnames":["Mangot"],"firstnames":["J.","F."],"suffixes":[]},{"propositions":[],"lastnames":["Poulain"],"firstnames":["J."],"suffixes":[]},{"propositions":[],"lastnames":["Labadie"],"firstnames":["K."],"suffixes":[]},{"propositions":[],"lastnames":["Logares"],"firstnames":["R."],"suffixes":[]},{"propositions":[],"lastnames":["Sunagawa"],"firstnames":["S."],"suffixes":[]},{"propositions":["de"],"lastnames":["Berardinis"],"firstnames":["V."],"suffixes":[]},{"propositions":[],"lastnames":["Salanoubat"],"firstnames":["M."],"suffixes":[]},{"propositions":[],"lastnames":["Dimier"],"firstnames":["C."],"suffixes":[]},{"propositions":[],"lastnames":["Kandels-Lewis"],"firstnames":["S."],"suffixes":[]},{"propositions":[],"lastnames":["Picheral"],"firstnames":["M."],"suffixes":[]},{"propositions":[],"lastnames":["Searson"],"firstnames":["S."],"suffixes":[]},{"propositions":[],"lastnames":["Tara","Oceans"],"firstnames":["Coordinators"],"suffixes":[]},{"propositions":[],"lastnames":["Pesant"],"firstnames":["S."],"suffixes":[]},{"propositions":[],"lastnames":["Poulton"],"firstnames":["N."],"suffixes":[]},{"propositions":[],"lastnames":["Stepanauskas"],"firstnames":["R."],"suffixes":[]},{"propositions":[],"lastnames":["Bork"],"firstnames":["P."],"suffixes":[]},{"propositions":[],"lastnames":["Bowler"],"firstnames":["C."],"suffixes":[]},{"propositions":[],"lastnames":["Hingamp"],"firstnames":["P."],"suffixes":[]},{"propositions":[],"lastnames":["Sullivan"],"firstnames":["M.","B."],"suffixes":[]},{"propositions":[],"lastnames":["Iudicone"],"firstnames":["D."],"suffixes":[]},{"propositions":[],"lastnames":["Massana"],"firstnames":["R."],"suffixes":[]},{"propositions":[],"lastnames":["Aury"],"firstnames":["J.","M."],"suffixes":[]},{"propositions":[],"lastnames":["Henrissat"],"firstnames":["B."],"suffixes":[]},{"propositions":[],"lastnames":["Karsenti"],"firstnames":["E."],"suffixes":[]},{"propositions":[],"lastnames":["Jaillon"],"firstnames":["O."],"suffixes":[]},{"propositions":[],"lastnames":["Sieracki"],"firstnames":["M."],"suffixes":[]},{"propositions":["de"],"lastnames":["Vargas"],"firstnames":["C."],"suffixes":[]},{"propositions":[],"lastnames":["Wincker"],"firstnames":["P."],"suffixes":[]}],"title":"Single-cell genomics of multiple uncultured stramenopiles reveals underestimated functional diversity across oceans","journal":"Nat Commun","volume":"9","number":"1","pages":"310","note":"Seeleuthner, Yoann Mondy, Samuel Lombard, Vincent Carradec, Quentin Pelletier, Eric Wessner, Marc Leconte, Jade Mangot, Jean-Francois Poulain, Julie Labadie, Karine Logares, Ramiro Sunagawa, Shinichi de Berardinis, Veronique Salanoubat, Marcel Dimier, Celine Kandels-Lewis, Stefanie Picheral, Marc Searson, Sarah Pesant, Stephane Poulton, Nicole Stepanauskas, Ramunas Bork, Peer Bowler, Chris Hingamp, Pascal Sullivan, Matthew B Iudicone, Daniele Massana, Ramon Aury, Jean-Marc Henrissat, Bernard Karsenti, Eric Jaillon, Olivier Sieracki, Mike de Vargas, Colomban Wincker, Patrick eng 294823/European Research Council/International Research Support, Non-U.S. Gov't England Nat Commun. 2018 Jan 22;9(1):310. doi: 10.1038/s41467-017-02235-3.","abstract":"Single-celled eukaryotes (protists) are critical players in global biogeochemical cycling of nutrients and energy in the oceans. While their roles as primary producers and grazers are well appreciated, other aspects of their life histories remain obscure due to challenges in culturing and sequencing their natural diversity. Here, we exploit single-cell genomics and metagenomics data from the circumglobal Tara Oceans expedition to analyze the genome content and apparent oceanic distribution of seven prevalent lineages of uncultured heterotrophic stramenopiles. Based on the available data, each sequenced genome or genotype appears to have a specific oceanic distribution, principally correlated with water temperature and depth. The genome content provides hypotheses for specialization in terms of cell motility, food spectra, and trophic stages, including the potential impact on their lifestyles of horizontal gene transfer from prokaryotes. Our results support the idea that prominent heterotrophic marine protists perform diverse functions in ocean ecology.","issn":"2041-1723 (Electronic) 2041-1723 (Linking)","doi":"10.1038/s41467-017-02235-3","url":"https://www.ncbi.nlm.nih.gov/pubmed/29358710","year":"2018","bibtex":"@article{RN92,\r\n author = {Seeleuthner, Y. and Mondy, S. and Lombard, V. and Carradec, Q. and Pelletier, E. and Wessner, M. and Leconte, J. and Mangot, J. F. and Poulain, J. and Labadie, K. and Logares, R. and Sunagawa, S. and de Berardinis, V. and Salanoubat, M. and Dimier, C. and Kandels-Lewis, S. and Picheral, M. and Searson, S. and Tara Oceans, Coordinators and Pesant, S. and Poulton, N. and Stepanauskas, R. and Bork, P. and Bowler, C. and Hingamp, P. and Sullivan, M. B. and Iudicone, D. and Massana, R. and Aury, J. M. and Henrissat, B. and Karsenti, E. and Jaillon, O. and Sieracki, M. and de Vargas, C. and Wincker, P.},\r\n title = {Single-cell genomics of multiple uncultured stramenopiles reveals underestimated functional diversity across oceans},\r\n journal = {Nat Commun},\r\n volume = {9},\r\n number = {1},\r\n pages = {310},\r\n note = {Seeleuthner, Yoann\r\nMondy, Samuel\r\nLombard, Vincent\r\nCarradec, Quentin\r\nPelletier, Eric\r\nWessner, Marc\r\nLeconte, Jade\r\nMangot, Jean-Francois\r\nPoulain, Julie\r\nLabadie, Karine\r\nLogares, Ramiro\r\nSunagawa, Shinichi\r\nde Berardinis, Veronique\r\nSalanoubat, Marcel\r\nDimier, Celine\r\nKandels-Lewis, Stefanie\r\nPicheral, Marc\r\nSearson, Sarah\r\nPesant, Stephane\r\nPoulton, Nicole\r\nStepanauskas, Ramunas\r\nBork, Peer\r\nBowler, Chris\r\nHingamp, Pascal\r\nSullivan, Matthew B\r\nIudicone, Daniele\r\nMassana, Ramon\r\nAury, Jean-Marc\r\nHenrissat, Bernard\r\nKarsenti, Eric\r\nJaillon, Olivier\r\nSieracki, Mike\r\nde Vargas, Colomban\r\nWincker, Patrick\r\neng\r\n294823/European Research Council/International\r\nResearch Support, Non-U.S. Gov't\r\nEngland\r\nNat Commun. 2018 Jan 22;9(1):310. doi: 10.1038/s41467-017-02235-3.},\r\n abstract = {Single-celled eukaryotes (protists) are critical players in global biogeochemical cycling of nutrients and energy in the oceans. While their roles as primary producers and grazers are well appreciated, other aspects of their life histories remain obscure due to challenges in culturing and sequencing their natural diversity. Here, we exploit single-cell genomics and metagenomics data from the circumglobal Tara Oceans expedition to analyze the genome content and apparent oceanic distribution of seven prevalent lineages of uncultured heterotrophic stramenopiles. Based on the available data, each sequenced genome or genotype appears to have a specific oceanic distribution, principally correlated with water temperature and depth. The genome content provides hypotheses for specialization in terms of cell motility, food spectra, and trophic stages, including the potential impact on their lifestyles of horizontal gene transfer from prokaryotes. Our results support the idea that prominent heterotrophic marine protists perform diverse functions in ocean ecology.},\r\n ISSN = {2041-1723 (Electronic)\r\n2041-1723 (Linking)},\r\n DOI = {10.1038/s41467-017-02235-3},\r\n url = {https://www.ncbi.nlm.nih.gov/pubmed/29358710},\r\n year = {2018},\r\n type = {Journal Article}\r\n}\r\n\r\n","author_short":["Seeleuthner, Y.","Mondy, S.","Lombard, V.","Carradec, Q.","Pelletier, E.","Wessner, M.","Leconte, J.","Mangot, J. F.","Poulain, J.","Labadie, K.","Logares, R.","Sunagawa, S.","de Berardinis, V.","Salanoubat, M.","Dimier, C.","Kandels-Lewis, S.","Picheral, M.","Searson, S.","Tara Oceans, C.","Pesant, S.","Poulton, N.","Stepanauskas, R.","Bork, P.","Bowler, C.","Hingamp, P.","Sullivan, M. B.","Iudicone, D.","Massana, R.","Aury, J. 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