Orthology inference in nonmodel organisms using transcriptomes and low-coverage genomes: improving accuracy and matrix occupancy for phylogenomics. Yang, Y. & Smith, S. A. Molecular Biology and Evolution, 31(11):3081–3092, November, 2014.
Orthology inference in nonmodel organisms using transcriptomes and low-coverage genomes: improving accuracy and matrix occupancy for phylogenomics [link]Paper  doi  bibtex   
@article{yang_orthology_2014,
	title = {Orthology inference in nonmodel organisms using transcriptomes and low-coverage genomes: improving accuracy and matrix occupancy for phylogenomics},
	volume = {31},
	issn = {1537-1719, 0737-4038},
	shorttitle = {Orthology {Inference} in {Nonmodel} {Organisms} {Using} {Transcriptomes} and {Low}-{Coverage} {Genomes}},
	url = {https://academic.oup.com/mbe/article-lookup/doi/10.1093/molbev/msu245},
	doi = {10.1093/molbev/msu245},
	language = {en},
	number = {11},
	urldate = {2018-12-17},
	journal = {Molecular Biology and Evolution},
	author = {Yang, Ya and Smith, Stephen A.},
	month = nov,
	year = {2014},
	pages = {3081--3092},
}

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