Bayesian Approach for Automatic Joint Parameter Estimation in 3D Image Reconstruction from Multi-Focus Microscope. Yoo, S., Ruiz, P., Huang, X., He, K., Wang, X., Gdor, I., Selewa, A., Daddysman, M., Ferrier, N. J., Hereld, M., Scherer, N., Cossairt, O., & Katsaggelos, A. K. In 2018 25th IEEE International Conference on Image Processing (ICIP), pages 3583–3587, oct, 2018. IEEE.
Bayesian Approach for Automatic Joint Parameter Estimation in 3D Image Reconstruction from Multi-Focus Microscope [link]Paper  doi  abstract   bibtex   
We present a Bayesian approach for 3D image reconstruction of an extended object imaged with multi-focus microscopy (MFM). MFM simultaneously captures multiple sub-images of different focal planes to provide 3D information of the sample. The naive method to reconstruct the object is to stack the sub-images along the z-axis, but the result suffers from poor resolution in the z-axis. The maximum a posteriori framework provides a way to reconstruct a 3D image according to its observation model and prior knowledge. It jointly estimates the 3D image and the model parameters. Experimental results with synthetic and real experimental data show that it enables the high-quality 3D reconstruction of an extended object from MFM.
@inproceedings{Seunghwan2018,
abstract = {We present a Bayesian approach for 3D image reconstruction of an extended object imaged with multi-focus microscopy (MFM). MFM simultaneously captures multiple sub-images of different focal planes to provide 3D information of the sample. The naive method to reconstruct the object is to stack the sub-images along the z-axis, but the result suffers from poor resolution in the z-axis. The maximum a posteriori framework provides a way to reconstruct a 3D image according to its observation model and prior knowledge. It jointly estimates the 3D image and the model parameters. Experimental results with synthetic and real experimental data show that it enables the high-quality 3D reconstruction of an extended object from MFM.},
author = {Yoo, Seunghwan and Ruiz, Pablo and Huang, Xiang and He, Kuan and Wang, Xiaolei and Gdor, Itay and Selewa, Alan and Daddysman, Matthew and Ferrier, Nicola J. and Hereld, Mark and Scherer, Norbert and Cossairt, Oliver and Katsaggelos, Aggelos K.},
booktitle = {2018 25th IEEE International Conference on Image Processing (ICIP)},
doi = {10.1109/ICIP.2018.8451309},
isbn = {978-1-4799-7061-2},
issn = {15224880},
keywords = {3D image reconstruction,Bayesian,Maximum a posteriori,Multi-focus microscopy,Total variation},
month = {oct},
pages = {3583--3587},
publisher = {IEEE},
title = {{Bayesian Approach for Automatic Joint Parameter Estimation in 3D Image Reconstruction from Multi-Focus Microscope}},
url = {https://ieeexplore.ieee.org/document/8451309/},
year = {2018}
}

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